RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 LIN9Q5TKA1 542 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 OLFML2BQ68BL8 750 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 DUPD1Q68J44 220 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 C1orf131Q8NDD1 294 aaKnown RBP10.82□□□□□ -0.68
MSH5-211ENST00000463144 WHAMMQ8TF30 809 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 USP6NLQ92738 828 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 ZIM3Q96PE6 472 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 SH3GL2Q99962 352 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 HERPUD2Q9BSE4 406 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 CXCL16Q9H2A7 254 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 DPH5Q9H2P9 285 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 ASB7Q9H672 318 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 PCDHGC3Q9UN70 934 aa10.82□□□□□ -0.68
MSH5-211ENST00000463144 GOLGA6L10A0A0M3HER8 536 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 GPR32O75388 356 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 F2P00734 622 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 HSPA6P17066 643 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 CYP2C19P33261 490 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 SLC1A1P43005 524 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 ZNF157P51786 506 aaPredicted RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 RPL7AP62424 266 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 HLTFQ14527 1009 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSH5-211ENST00000463144 PPP2R5EQ16537 467 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 CYP1B1Q16678 543 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 ALS2CLQ60I27 953 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSH5-211ENST00000463144 DDX27Q96GQ7 796 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 TRIP11Q15643 1979 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 FSCN2O14926 492 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 SMIM10L2AP0DMW4 78 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 SMIM10L2BP0DMW5 78 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 HOXA11P31270 313 aaPredicted RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 CDH5P33151 784 aaPredicted RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 HSPA9P38646 679 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 RAD23BP54727 409 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 ORC1Q13415 861 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 TAF1CQ15572 869 aaPredicted RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 ZNF667Q5HYK9 610 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 DENND1BQ6P3S1 775 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 C17orf99Q6UX52 265 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 ZNF410Q86VK4 478 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 JAMLQ86YT9 394 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 FEZF2Q8TBJ5 459 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 MAGOHBQ96A72 148 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 TWNKQ96RR1 684 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 ERP44Q9BS26 406 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 TRIM31Q9BZY9 425 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 FAM49AQ9H0Q0 323 aaPredicted RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 SMYD3Q9H7B4 428 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 MRPL47Q9HD33 250 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSH5-211ENST00000463144 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 HMGXB4Q9UGU5 601 aa10.81□□□□□ -0.68
MSH5-211ENST00000463144 UTP11Q9Y3A2 253 aaKnown RBP10.81□□□□□ -0.68
MSH5-211ENST00000463144 CITO14578 2027 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 TMEM191CA6NGB0 347 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 RRN3P2A6NIE6 340 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 TLR3O15455 904 aaKnown RBP10.8□□□□□ -0.68
MSH5-211ENST00000463144 ERLIN2O94905 339 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 LSM8O95777 96 aaKnown RBP10.8□□□□□ -0.68
MSH5-211ENST00000463144 CHRNA3P32297 505 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 ZNF252P-AS1Q0IIN9 211 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 PPP1R15BQ5SWA1 713 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 RUFY4Q6ZNE9 571 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 TMEM35BQ8NCS4 154 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 ACAP3Q96P50 834 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 PCYOX1Q9UHG3 505 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 CYTH4Q9UIA0 394 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 AGAP1Q9UPQ3 857 aa10.8□□□□□ -0.68
MSH5-211ENST00000463144 TRIP12Q14669 1992 aaPredicted RBP10.8□□□□□ -0.68
MSH5-211ENST00000463144 MBLAC1A4D2B0 266 aaPredicted RBP10.79□□□□□ -0.68
MSH5-211ENST00000463144 HSF2BPO75031 334 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 IGHA2P01877 340 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 EIF4BP23588 611 aaKnown RBP10.79□□□□□ -0.68
MSH5-211ENST00000463144 POLR2BP30876 1174 aaKnown RBP10.79□□□□□ -0.68
MSH5-211ENST00000463144 COILP38432 576 aaPredicted RBP10.79□□□□□ -0.68
MSH5-211ENST00000463144 KCNJ1P48048 391 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 ADAM17P78536 824 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 OGDHQ02218 1023 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 TMEM132DQ14C87 1099 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 UAP1Q16222 522 aaPredicted RBP10.79□□□□□ -0.68
MSH5-211ENST00000463144 PPP1R2P3Q6NXS1 205 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
MSH5-211ENST00000463144 ANKS1BQ7Z6G8 1248 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 TLK2Q86UE8 772 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 SLC4A11Q8NBS3 891 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 EXOC4Q96A65 974 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 ARL8AQ96BM9 186 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 ZNF518BQ9C0D4 1074 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 ELOVL4Q9GZR5 314 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 FAM204AQ9H8W3 233 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 ZDHHC18Q9NUE0 388 aa10.79□□□□□ -0.68
MSH5-211ENST00000463144 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms