RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 OSTNP61366 133 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 DMP1Q13316 513 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF568Q3ZCX4 644 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 WDR44Q5JSH3 913 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 VITQ6UXI7 678 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF852Q6ZMS4 543 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 GPBP1Q86WP2 473 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 MAP4K3Q8IVH8 894 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 TMEM161BQ8NDZ6 487 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 BEST2Q8NFU1 509 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 KCNN1Q92952 543 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 BORCS6Q96GS4 357 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 DRC1Q96MC2 740 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZSWIM3Q96MP5 696 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF396Q96N95 335 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 TARS2Q9BW92 718 aaKnown RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 CHRDQ9H2X0 955 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 TMEM134Q9H6X4 195 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 C17orf75Q9HAS0 396 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 PARD6AQ9NPB6 346 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 KCND2Q9NZV8 630 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 CEP72Q9P209 647 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 NCDNQ9UBB6 729 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 TUBGCP4Q9UGJ1 667 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 FBXL5Q9UKA1 691 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 HELZP42694 1942 aaKnown RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 K7ERI5 159 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 PRRG1O14668 218 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 SLC16A4O15374 487 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 MAPTP10636 758 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 MCF2P10911 925 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 PLS3P13797 630 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 DDIT3P35638 169 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 NCKAP1LP55160 1127 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 ADCY1Q08828 1119 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 GAS6Q14393 721 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 E2F4Q16254 413 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 SHC4Q6S5L8 630 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 MPZL3Q6UWV2 235 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 DNAJC19Q96DA6 116 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 RSPRY1Q96DX4 576 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZBTB45Q96K62 511 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 NELL2Q99435 816 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 NTPCRQ9BSD7 190 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 CCDC94Q9BW85 323 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 HAPLN2Q9GZV7 340 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 CRISPLD1Q9H336 500 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 CYP4F11Q9HBI6 524 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF334Q9HCZ1 680 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 KMT5AQ9NQR1 393 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 TOPORSQ9NS56 1045 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 SLC38A7Q9NVC3 462 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 STK17AQ9UEE5 414 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 ODF2LQ9ULJ1 636 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 NDRG2Q9UN36 371 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 AKAP13Q12802 2813 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 NUP205Q92621 2012 aa8.63□□□□□ -1.03
CDC42BPA-210ENST00000462553 IGF2RP11717 2491 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 PTPRDP23468 1912 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 MYMKA6NI61 221 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 CCDC169A6NNP5 214 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 CUTAO60888 179 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 GJA1P17302 382 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 GDI1P31150 447 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ELF1P32519 619 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 RPL9P32969 192 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 VIPR2P41587 438 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ATXN1P54253 815 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 YARSP54577 528 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ARPP19P56211 112 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 TWF1Q12792 350 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 DHX8Q14562 1220 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 NOLC1Q14978 699 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 SLC10A6Q3KNW5 377 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 CTXN3Q4LDR2 81 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 SEZ6Q53EL9 994 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 RRAGBQ5VZM2 374 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 TPGS2Q68CL5 300 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ATL3Q6DD88 541 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF280DQ6N043 979 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 PDZD4Q76G19 769 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 APBB1IPQ7Z5R6 666 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 TMC8Q8IU68 726 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 SHKBP1Q8TBC3 707 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ATRIPQ8WXE1 791 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 DDX12PQ92771 950 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 SMARCD2Q92925 531 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 ACAP3Q96P50 834 aa8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 TRMT61BQ9BVS5 477 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-210ENST00000462553 LRRC3Q9BY71 257 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms