RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 RAB33AQ14088 237 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 MORC3Q14149 939 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 NFIL3Q16649 462 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 DCAF17Q5H9S7 520 aaPredicted RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 WDR44Q5JSH3 913 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 DCP1BQ8IZD4 617 aaKnown RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 C12orf76Q8N812 135 aaPredicted RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 C1orf127Q8N9H9 656 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 MLKLQ8NB16 471 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 OR5B17Q8NGF7 314 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 SPATA20Q8TB22 786 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 SLC22A17Q8WUG5 538 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 SMG7Q92540 1137 aaKnown RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 EEF2KMTQ96G04 330 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 CLSTN3Q9BQT9 956 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 ADAM7Q9H2U9 754 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 METTL14Q9HCE5 456 aaKnown RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 MAGEC2Q9UBF1 373 aaPredicted RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 ARMCX3Q9UH62 379 aaPredicted RBP10.29□□□□□ -0.76
PKP4-208ENST00000462335 FBXL5Q9UKA1 691 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 NR2E1Q9Y466 385 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 CDH23Q9H251 3354 aa10.29□□□□□ -0.76
PKP4-208ENST00000462335 PDCD11Q14690 1871 aaKnown RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 PPEF2O14830 753 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 OAZ2O95190 189 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 GNA14O95837 355 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 C8AP07357 584 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 PCSK1P29120 753 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 LTBRP36941 435 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 ALDH1A3P47895 512 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 LHX1P48742 406 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 STX17P56962 302 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 NCOA4Q13772 614 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 CBX2Q14781 532 aaPredicted RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 SGSM1Q2NKQ1 1148 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 ZNF699Q32M78 642 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 ZNF667Q5HYK9 610 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 WSCD1Q658N2 575 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 TPGS2Q68CL5 300 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 CYP26C1Q6V0L0 522 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 RNF168Q8IYW5 571 aaPredicted RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 ZNF461Q8TAF7 563 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 ADAMTS19Q8TE59 1207 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 PARD3BQ8TEW8 1205 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 ACSF2Q96CM8 615 aaPredicted RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 RPGRIP1Q96KN7 1286 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 CEP63Q96MT8 703 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 MKNK1Q9BUB5 465 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 CLEC1BQ9P126 229 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 MAFFQ9ULX9 164 aa10.28□□□□□ -0.76
PKP4-208ENST00000462335 USP15Q9Y4E8 981 aaPredicted RBP10.28□□□□□ -0.76
PKP4-208ENST00000462335 LRRIQ3A6PVS8 624 aaPredicted RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 SLC16A3O15427 465 aaKnown RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 MBTPS2O43462 519 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 AKAP3O75969 853 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 GLP2RO95838 553 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 TPM2P07951 284 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 HNRNPA1P09651 372 aaKnown RBP eCLIP10.27□□□□□ -0.77
PKP4-208ENST00000462335 IGFBP6P24592 240 aaPredicted RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 GTF2H1P32780 548 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 GNL1P36915 607 aaPredicted RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 GCLMP48507 274 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 EPHB3P54753 998 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 ADCY1Q08828 1119 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 SMARCB1Q12824 385 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 PLD1Q13393 1074 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 SLC39A12Q504Y0 691 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 CD300LGQ6UXG3 332 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 RTL10Q7L3V2 364 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 FILIP1Q7Z7B0 1213 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 FAM114A1Q8IWE2 563 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 ADGRF2Q8IZF7 708 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 TOP6BLQ8N6T0 577 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 SMRP1Q8NCR6 262 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 VN1R2Q8NFZ6 395 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 OR6B3Q8NGW1 331 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 SLC7A14Q8TBB6 771 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 TMEM174Q8WUU8 243 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 TAF4BQ92750 862 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 ZNF512Q96ME7 567 aaPredicted RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 PGLYRP2Q96PD5 576 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 SRRTQ9BXP5 876 aaKnown RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 ZDHHC7Q9NXF8 308 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 DDX43Q9NXZ2 648 aaKnown RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 PRKAG3Q9UGI9 489 aa10.27□□□□□ -0.77
PKP4-208ENST00000462335 AFF4Q9UHB7 1163 aaKnown RBP10.27□□□□□ -0.77
PKP4-208ENST00000462335 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
PKP4-208ENST00000462335 ANK1P16157 1881 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms