RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ERICH2A1L162 156 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 FITM1A5D6W6 292 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 PRSS47A8MTI9 375 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 FADS2P1A8MWK0 482 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 AURKAO14965 403 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 FGF10O15520 208 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 XPOTO43592 962 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 PFKFB2O60825 505 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 RHOBTB3O94955 611 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 VDRP11473 427 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 RAC2P15153 192 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 PDIA3P30101 505 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 GRK6P43250 576 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 NOP2P46087 812 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 NOVP48745 357 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 NT5C2P49902 561 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 RTP1P59025 263 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 GUCY1A3Q02108 690 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 SCRN1Q12765 414 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 LRRC32Q14392 662 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 SEPT2Q15019 361 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 NR0B2Q15466 257 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 SF1Q15637 639 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 KCNMB1Q16558 191 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 TUBB8Q3ZCM7 444 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CERKLQ49MI3 558 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 GTF2IRD2BQ6EKJ0 949 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 FAM43BQ6ZT52 329 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CEP128Q6ZU80 1094 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 MAATS1Q7Z4T9 603 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 KRT77Q7Z794 578 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 GTF2IRD2Q86UP8 949 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 SLC41A1Q8IVJ1 513 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CCDC83Q8IWF9 413 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 SUGP1Q8IWZ8 645 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 OXR1Q8N573 874 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 ANKS4BQ8N8V4 417 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 NECAB1Q8N987 351 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 TMEM145Q8NBT3 493 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CXorf38Q8TB03 319 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 DEPTORQ8TB45 409 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CHTF18Q8WVB6 975 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CCT6BQ92526 530 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 GTF3C6Q969F1 213 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 DCPSQ96C86 337 aaKnown RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 SHISA4Q96DD7 197 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 ZNF274Q96GC6 653 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CEP95Q96GE4 821 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 LIN37Q96GY3 246 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 ZSCAN31Q96LW9 406 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 CCDC17Q96LX7 622 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 ZFYVE21Q9BQ24 234 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 UBAC1Q9BSL1 405 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 GLIS2Q9BZE0 524 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 NKX2-4Q9H2Z4 354 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 ZNF287Q9HBT7 754 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 EVLQ9UI08 416 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-205ENST00000462254 INVSQ9Y283 1065 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 PCDHGB3Q9Y5G1 929 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 KIAA1217Q5T5P2 1943 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 PLXNA1Q9UIW2 1896 aa5.26□□□□□ -1.57
CSMD3-205ENST00000462254 C2orf71A6NGG8 1288 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CCDC69A6NI79 296 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 GOLGA8AA7E2F4 631 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 GOLGA8BA8MQT2 603 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 ARVCFO00192 962 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 MPHOSPH10O00566 681 aaKnown RBP5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CTDNEP1O95476 244 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 AGR2O95994 175 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 GH2P01242 217 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 SOD2P04179 222 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 VEGFAP15692 232 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-205ENST00000462254 ATP2A2P16615 1042 aaKnown RBP5.25□□□□□ -1.57
CSMD3-205ENST00000462254 TNFAIP3P21580 790 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 KIR2DL1P43626 348 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-205ENST00000462254 KIR2DL2P43627 348 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-205ENST00000462254 KCNJ6P48051 423 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 FAM193AP78312 1265 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 AMPD2Q01433 879 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CHRNEQ04844 493 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CYP4F3Q08477 520 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 TROAPQ12815 778 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 PDE1CQ14123 709 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-205ENST00000462254 TRIM14Q14142 442 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 ATAT1Q5SQI0 421 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CFAP161Q6P656 301 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 TMEM179Q6ZVK1 233 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 MICU3Q86XE3 530 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 SPPL2CQ8IUH8 684 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 SIAH1Q8IUQ4 282 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CNPY4Q8N129 248 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 IGSF22Q8N9C0 903 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CHST14Q8NCH0 376 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 ANKS1AQ92625 1134 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 CDCA5Q96FF9 252 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 ASIC4Q96FT7 647 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 TEKT5Q96M29 485 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 PPM1MQ96MI6 270 aa5.25□□□□□ -1.57
CSMD3-205ENST00000462254 TMEM47Q9BQJ4 181 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms