RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 KRT77Q7Z794 578 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PRPF39Q86UA1 669 aaKnown RBP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CYP4Z1Q86W10 505 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 ERP27Q96DN0 273 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 EPC1Q9H2F5 836 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 ZMYND8Q9ULU4 1186 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 KANSL1LA0AUZ9 987 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 FAM47E-STBD1D6RA91 191 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 POU4F1Q01851 419 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 ANKS6Q68DC2 871 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 C10orf53Q8N6V4 93 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 MAGEA13PA6NCF6 341 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PDZK1P1A8MUH7 402 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CYP26A1O43174 497 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CAND2O75155 1236 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PDGFRAP16234 1089 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 MZF1P28698 734 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 TTLL9Q3SXZ7 439 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 CYFIP2Q96F07 1278 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 STK33Q9BYT3 514 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 FANCEQ9HB96 536 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 BARHL2Q9NY43 387 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 SPASTQ9UBP0 616 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 ASAP1Q9ULH1 1129 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 KCNH4Q9UQ05 1017 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PCDHA10Q9Y5I2 948 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 PTPRKQ15262 1439 aa9.39□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L15C9J2P7 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L13C9JLJ4 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L11C9JVI0 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L18D6R9N7 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L22D6RA61 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L17D6RBQ6 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L19D6RCP7 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L20D6RJB6 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM24O15164 1050 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM13O60858 407 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RPS6P62753 249 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 ALDH6A1Q02252 535 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 CENPCQ03188 943 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L24Q0WX57 530 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PKN2Q16513 984 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PROSER3Q2NL68 480 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 ERAP2Q6P179 960 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP17L6PQ6QN14 398 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 FMR1NBQ8N0W7 255 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 OSBPL8Q9BZF1 889 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 CYP39A1Q9NYL5 469 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 LIMA1Q9UHB6 759 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 ABCA5Q8WWZ7 1642 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM49P0CI25 452 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TRIM49CP0CI26 452 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 DARSP14868 501 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 KRT20P35900 424 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 DSG1Q02413 1049 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 LONRF1Q17RB8 773 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 NAPEPLDQ6IQ20 393 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PI16Q6UXB8 463 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SRLQ86TD4 932 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 LINC00523Q86TU6 105 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SLC7A14Q8TBB6 771 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 USP33Q8TEY7 942 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 E2F7Q96AV8 911 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SEC16BQ96JE7 1060 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 WRNIP1Q96S55 665 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RFX7Q2KHR2 1363 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 AATKQ6ZMQ8 1374 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF335Q9H4Z2 1342 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 CFAP43Q8NDM7 1665 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SAC3D1A6NKF1 404 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RGS5O15539 181 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 CD4P01730 458 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 GPSM2P81274 684 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 KPNB1Q14974 876 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PABPC5Q96DU9 382 aaKnown RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 MANSC1Q9H8J5 431 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RSAD1Q9HA92 442 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 KLHL11Q9NVR0 708 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 RPS6KB2Q9UBS0 482 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 MARCOQ9UEW3 520 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-205ENST00000461221 SH3BP1Q9Y3L3 701 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 DYRK3O43781 588 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PDE5AO76074 875 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 IFNA14P01570 189 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 EPB42P16452 691 aa9.38□□□□□ -0.91
BRCA1-205ENST00000461221 TALDO1P37837 337 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms