RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 CDK7P50613 346 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 EPHB1P54762 984 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 LSAMPQ13449 338 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 EFTUD2Q15029 972 aaKnown RBP eCLIP13.16□□□□□ -0.38e-7■■■□□ 18.5
AGRN-203ENST00000461111 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
AGRN-203ENST00000461111 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 MAP7D3Q8IWC1 876 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 USP6NLQ92738 828 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 CFAP57Q96MR6 1250 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 ZNF148Q9UQR1 794 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 NEU2Q9Y3R4 380 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 FAM237BA0A1B0GVD1 139 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 MYL2P10916 166 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 BMP3P12645 472 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 HIRAP54198 1017 aaPredicted RBP13.16□□□□□ -0.3
AGRN-203ENST00000461111 Q4G0T1 1027 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 SLC47A2Q86VL8 602 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
AGRN-203ENST00000461111 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
AGRN-203ENST00000461111 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 TSSK1BQ9BXA7 367 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
AGRN-203ENST00000461111 TDRKHQ9Y2W6 561 aaKnown RBP13.16□□□□□ -0.3
AGRN-203ENST00000461111 MEI4A8MW99 385 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 F5H6K3 240 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 FCHO1O14526 889 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 TGFB1I1O43294 461 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 ZNF189O75820 626 aaPredicted RBP13.15□□□□□ -0.3
AGRN-203ENST00000461111 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RHBDL3P58872 404 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 MED21Q13503 144 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 STXBP4Q6ZWJ1 553 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RAPH1Q70E73 1250 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SDCCAG8Q86SQ7 713 aaPredicted RBP13.15□□□□□ -0.3
AGRN-203ENST00000461111 OLIG1Q8TAK6 271 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 TCP10LQ8TDR4 215 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SLC26A7Q8TE54 656 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RILPQ96NA2 401 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 GPR88Q9GZN0 384 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 LRRC19Q9H756 370 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SAR1AQ9NR31 198 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 KANSL3Q9P2N6 904 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 ESYT2A0FGR8 921 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
AGRN-203ENST00000461111 CD58P19256 250 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 IVDP26440 423 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 PPP4CP60510 307 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 CDC16Q13042 620 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 PDIA2Q13087 525 aaKnown RBP13.15□□□□□ -0.3
AGRN-203ENST00000461111 GRAMD1BQ3KR37 738 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 NME8Q8N427 588 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SHKBP1Q8TBC3 707 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 CPA5Q8WXQ8 436 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 EP400Q96L91 3159 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SPATA31C1P0DKV0 1188 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RPA1P27694 616 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SERPINB6P35237 376 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 ARL4CP56559 192 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 AP2B1P63010 937 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 DYNLT1P63172 113 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RASA2Q15283 850 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 SESTD1Q86VW0 696 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
AGRN-203ENST00000461111 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 PIP4K2CQ8TBX8 421 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 DENND1AQ8TEH3 1009 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 MTBPQ96DY7 904 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
AGRN-203ENST00000461111 LGALS13Q9UHV8 139 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 TMCO1Q9UM00 188 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 TIAM2Q8IVF5 1701 aa13.15□□□□□ -0.3
AGRN-203ENST00000461111 BGNP21810 368 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 ABCD1P33897 745 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 ALDH18A1P54886 795 aaKnown RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 R3HDM1Q15032 1099 aaKnown RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 MMEL1Q495T6 779 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 SCUBE1Q8IWY4 988 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 NR1H4Q96RI1 486 aaPredicted RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
AGRN-203ENST00000461111 SLC16A4O15374 487 aa13.14□□□□□ -0.31
AGRN-203ENST00000461111 GH2P01242 217 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms