RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 NOMO3P69849 1222 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 CUL1Q13616 776 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 MESDQ14696 234 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 AMHR2Q16671 573 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 SGSM1Q2NKQ1 1148 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 EEF1DP3Q658K8 133 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 TMEM270Q6UE05 265 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 SND1Q7KZF4 910 aaKnown RBP eCLIP18.02■□□□□ 0.476e-12■■□□□ 13.6
YIPF3-205ENST00000460547 MON1BQ7L1V2 547 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 MREGQ8N565 214 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 OR6J1Q8NGC5 347 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 CASKIN2Q8WXE0 1202 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 FAXDC2Q96IV6 333 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 AP1M1Q9BXS5 423 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 MINDY3Q9H8M7 445 aa18.02■□□□□ 0.47
YIPF3-205ENST00000460547 GOLGA6L10A0A0M3HER8 536 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 MCF2P10911 925 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 TMOD1P28289 359 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 GNA15P30679 374 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 NSFP46459 744 aaKnown RBP18.01■□□□□ 0.47
YIPF3-205ENST00000460547 CPT1AP50416 773 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 SNX17Q15036 470 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 KYAT1Q16773 422 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 TRIM60Q495X7 471 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 HSP90B2PQ58FF3 399 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 CHRDL2Q6WN34 429 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 MAATS1Q7Z4T9 603 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 PHF13Q86YI8 300 aaPredicted RBP18.01■□□□□ 0.47
YIPF3-205ENST00000460547 CCDC26Q8TAB7 109 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 WHAMMQ8TF30 809 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 KRT35Q92764 455 aa18.01■□□□□ 0.47
YIPF3-205ENST00000460547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.01■□□□□ 0.47
YIPF3-205ENST00000460547 CABYRO75952 493 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 TNNC2P02585 160 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 ITGA4P13612 1032 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 CARSP49589 748 aaKnown RBP18■□□□□ 0.47
YIPF3-205ENST00000460547 NAA35Q5VZE5 725 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 EFCAB13Q8IY85 973 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 SEC14L1Q92503 715 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 ANKRD36BP1Q96IX9 119 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 DDX47Q9H0S4 455 aaKnown RBP18■□□□□ 0.47
YIPF3-205ENST00000460547 COLQQ9Y215 455 aaPredicted RBP18■□□□□ 0.47
YIPF3-205ENST00000460547 PCDHA3Q9Y5H8 950 aa18■□□□□ 0.47
YIPF3-205ENST00000460547 ZSCAN5CA6NGD5 496 aaPredicted RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 H3BRB1 525 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 MMP3P08254 477 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 IQCF3P0C7M6 154 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 TMEM191BP0C7N4 346 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 ZNF286BP0CG31 522 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 MYL6P60660 151 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 IGBP1P78318 339 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 C1QBPQ07021 282 aaKnown RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 MTHFD1LQ6UB35 978 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 CXCL17Q6UXB2 119 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 ZBTB10Q96DT7 871 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 XYLT2Q9H1B5 865 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 TUT1Q9H6E5 874 aaKnown RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 RPF1Q9H9Y2 349 aaKnown RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 TMEM110-MUSTN1A8MSY1 372 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 POLR3GO15318 223 aaPredicted RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 SPOPO43791 374 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 LSM8O95777 96 aaKnown RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 CALCAP01258 141 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 SLC1A1P43005 524 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 MARCKSL1P49006 195 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 YWHAEP62258 255 aaKnown RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 TLE2Q04725 743 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 TRPC3Q13507 836 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 TMEM132AQ24JP5 1023 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 LIN9Q5TKA1 542 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 THNSL1Q8IYQ7 743 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 CYFIP2Q96F07 1278 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 HINFPQ9BQA5 517 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 PRDM5Q9NQX1 630 aaPredicted RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 CHORDC1Q9UHD1 332 aaPredicted RBP17.99■□□□□ 0.47
YIPF3-205ENST00000460547 NFU1Q9UMS0 254 aa17.99■□□□□ 0.47
YIPF3-205ENST00000460547 A0A087WZ62 844 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 ESYT3A0FGR9 886 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 FAM170AA1A519 330 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 DCDC2CA8MYV0 355 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 PQBP1O60828 265 aaKnown RBP17.98■□□□□ 0.47
YIPF3-205ENST00000460547 RRM1P23921 792 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 TFAMQ00059 246 aaKnown RBP17.98■□□□□ 0.47
YIPF3-205ENST00000460547 DMTNQ08495 405 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 PPFIA1Q13136 1202 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 GRIK4Q16099 956 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 DGKDQ16760 1214 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 ZNF699Q32M78 642 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 SEL1L2Q5TEA6 688 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 ZNF410Q86VK4 478 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 CEP120Q8N960 986 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 CPA5Q8WXQ8 436 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 FDXACB1Q9BRP7 624 aaPredicted RBP17.98■□□□□ 0.47
YIPF3-205ENST00000460547 PDZD7Q9H5P4 517 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 AKT3Q9Y243 479 aa17.98■□□□□ 0.47
YIPF3-205ENST00000460547 MROH7Q68CQ1 1323 aa17.97■□□□□ 0.47
YIPF3-205ENST00000460547 GOLGA6BA6NDN3 693 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms