RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 NDUFA8P51970 172 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 WNT7BP56706 349 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 GPR17Q13304 367 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 KNOP1Q1ED39 458 aaKnown RBP24.82■■□□□ 1.56
PTPN4-208ENST00000460289 PABPC1LQ4VXU2 614 aaKnown RBP24.82■■□□□ 1.56
PTPN4-208ENST00000460289 RNF19BQ6ZMZ0 732 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 EXOC1Q9NV70 894 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 DNMT3BQ9UBC3 853 aaKnown RBP24.82■■□□□ 1.56
PTPN4-208ENST00000460289 ITGA11Q9UKX5 1188 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 INSL5Q9Y5Q6 135 aa24.82■■□□□ 1.56
PTPN4-208ENST00000460289 ITGB3P05106 788 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 NTHL1P78549 312 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 CBWD2Q8IUF1 395 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 THEM5Q8N1Q8 247 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 CSGALNACT2Q8N6G5 542 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 C1orf127Q8N9H9 656 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 FSIP1Q8NA03 581 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 ASIC4Q96FT7 647 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 BORCS6Q96GS4 357 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 CDH7Q9ULB5 785 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 AGAP1Q9UPQ3 857 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 R3HCC1Q9Y3T6 440 aaKnown RBP24.81■■□□□ 1.56
PTPN4-208ENST00000460289 TECTAO75443 2155 aa24.81■■□□□ 1.56
PTPN4-208ENST00000460289 TMEM191BP0C7N4 346 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 POLR2BP30876 1174 aaKnown RBP24.8■■□□□ 1.56
PTPN4-208ENST00000460289 SNRNP35Q16560 246 aaKnown RBP24.8■■□□□ 1.56
PTPN4-208ENST00000460289 KMT5BQ4FZB7 885 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 ELMOD1Q8N336 334 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 LRRC52Q8N7C0 313 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 XXYLT1Q8NBI6 393 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 GOLGA5Q8TBA6 731 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 CCDC47Q96A33 483 aaKnown RBP24.8■■□□□ 1.56
PTPN4-208ENST00000460289 ANKRD36BP1Q96IX9 119 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 AVENQ9NQS1 362 aaPredicted RBP24.8■■□□□ 1.56
PTPN4-208ENST00000460289 HCFC1R1Q9NWW0 138 aa24.8■■□□□ 1.56
PTPN4-208ENST00000460289 CLIC2O15247 247 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 OR4Q2P0C623 313 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 RBP5P82980 135 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 STK4Q13043 487 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 IQCEQ6IPM2 695 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 C12orf56Q8IXR9 622 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 CCDC34Q96HJ3 373 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 ZNF512Q96ME7 567 aaPredicted RBP24.79■■□□□ 1.56
PTPN4-208ENST00000460289 GDPD2Q9HCC8 539 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 INTS13Q9NVM9 706 aa24.79■■□□□ 1.56
PTPN4-208ENST00000460289 ARIH1Q9Y4X5 557 aaPredicted RBP24.79■■□□□ 1.56
PTPN4-208ENST00000460289 TNNC2P02585 160 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 RPN1P04843 607 aaKnown RBP24.78■■□□□ 1.56
PTPN4-208ENST00000460289 RHOP08100 348 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 KRT19P08727 400 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 CYP2J2P51589 502 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 DUOXA2Q1HG44 320 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 KRBA2Q6ZNG9 492 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 WDR49Q8IV35 697 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 RDH13Q8NBN7 331 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 FGF13Q92913 245 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 MTMR12Q9C0I1 747 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 RAPGEFL1Q9UHV5 662 aa24.78■■□□□ 1.56
PTPN4-208ENST00000460289 MRPS23Q9Y3D9 190 aaKnown RBP24.78■■□□□ 1.56
PTPN4-208ENST00000460289 GOLGA6L4A6NEF3 574 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 PRPF40AO75400 957 aaKnown RBP24.77■■□□□ 1.56
PTPN4-208ENST00000460289 ZNF202O95125 648 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 TWF1Q12792 350 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 PLD1Q13393 1074 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 WSCD1Q658N2 575 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 SUGP1Q8IWZ8 645 aaKnown RBP24.77■■□□□ 1.56
PTPN4-208ENST00000460289 FBXL6Q8N531 539 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 ITFG1Q8TB96 612 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 PGLYRP2Q96PD5 576 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 FNBP1Q96RU3 617 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 CORO1BQ9BR76 489 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 HSFX1Q9UBD0 423 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 DUSP12Q9UNI6 340 aa24.77■■□□□ 1.56
PTPN4-208ENST00000460289 TCHHQ07283 1943 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 SCN1AP35498 2009 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 ANHXE9PGG2 379 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 ZNF197O14709 1029 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 KIF20AO95235 890 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 SMARCB1Q12824 385 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 MYO1EQ12965 1108 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 DUSP4Q13115 394 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 CYP4A22Q5TCH4 519 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 CENPPQ6IPU0 288 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 SLC44A3Q8N4M1 653 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 KIAA0895Q8NCT3 520 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 CXorf38Q8TB03 319 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 RSAD2Q8WXG1 361 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 SMOC2Q9H3U7 446 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 GOLPH3LQ9H4A5 285 aa24.76■■□□□ 1.55
PTPN4-208ENST00000460289 EXOC3O60645 756 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 HUS1O60921 280 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 MICAL2O94851 1124 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 ALDH1A3P47895 512 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 HTR4Q13639 388 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 LMBRD2Q68DH5 695 aaPredicted RBP24.75■■□□□ 1.55
PTPN4-208ENST00000460289 MTSS1LQ765P7 747 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 TMEM86AQ8N2M4 240 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 LEMD2Q8NC56 503 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 OR5B17Q8NGF7 314 aa24.75■■□□□ 1.55
PTPN4-208ENST00000460289 OR10T2Q8NGX3 314 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms