RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 RARS2Q5T160 578 aaKnown RBP23.43■■□□□ 1.34
SSNA1-202ENST00000459860 LIN9Q5TKA1 542 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 SYCE2Q6PIF2 218 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 ADSSL1Q8N142 457 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 TRIML1Q8N9V2 468 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 APOL5Q9BWW9 433 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 KIAA1468Q9P260 1216 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 CYB561D2O14569 222 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 CETN3O15182 167 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 SPTLC1O15269 473 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 PSMC2P35998 433 aaKnown RBP23.42■■□□□ 1.34
SSNA1-202ENST00000459860 CASP4P49662 377 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 LRRC63Q05C16 580 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 RAB33AQ14088 237 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 MRPL58Q14197 206 aaKnown RBP23.42■■□□□ 1.34
SSNA1-202ENST00000459860 OVOS1Q6IE37 1185 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 CENPPQ6IPU0 288 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 TRAPPC11Q7Z392 1133 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 FAM186BQ8IYM0 893 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 KREMEN2Q8NCW0 462 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 DHTKD1Q96HY7 919 aaPredicted RBP23.42■■□□□ 1.34
SSNA1-202ENST00000459860 CLSTN2Q9H4D0 955 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 FBXL5Q9UKA1 691 aa23.42■■□□□ 1.34
SSNA1-202ENST00000459860 USP15Q9Y4E8 981 aaPredicted RBP23.42■■□□□ 1.34
SSNA1-202ENST00000459860 TIMM13Q9Y5L4 95 aaPredicted RBP23.42■■□□□ 1.34
SSNA1-202ENST00000459860 LOC730098B7Z3J9 87 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 PHACTR2O75167 634 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 SPATA31D3P0C874 917 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 CPB1P15086 417 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 ARPP19P56211 112 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 TRPC3Q13507 836 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 MORC3Q14149 939 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 SLC8B1Q6J4K2 584 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 LILRA6Q6PI73 481 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 SPATA31D4Q6ZUB0 917 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 INTS8Q75QN2 995 aaKnown RBP23.41■■□□□ 1.34
SSNA1-202ENST00000459860 TMC2Q8TDI7 906 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 PARD3BQ8TEW8 1205 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 FAM84AQ96KN4 292 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 RIPOR3Q96MK2 946 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 NUP62CLQ9H1M0 184 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 ADAM7Q9H2U9 754 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 SIX4Q9UIU6 781 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 FBXW11Q9UKB1 542 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 MUC6Q6W4X9 2439 aa23.41■■□□□ 1.34
SSNA1-202ENST00000459860 OR6C75A6NL08 312 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 LRRIQ3A6PVS8 624 aaPredicted RBP23.4■■□□□ 1.34
SSNA1-202ENST00000459860 ADAM12O43184 909 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 HUS1O60921 280 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 CLSTN1O94985 981 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 OAZ2O95190 189 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 EPB41P11171 864 aaKnown RBP23.4■■□□□ 1.34
SSNA1-202ENST00000459860 CCNE1P24864 410 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 ROR1Q01973 937 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 BIRC3Q13489 604 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 CBX2Q14781 532 aaPredicted RBP23.4■■□□□ 1.34
SSNA1-202ENST00000459860 KLHL10Q6JEL2 608 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 C12orf76Q8N812 135 aaPredicted RBP23.4■■□□□ 1.34
SSNA1-202ENST00000459860 HPDLQ96IR7 371 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 NECTIN4Q96NY8 510 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 MKNK1Q9BUB5 465 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 S1PR5Q9H228 398 aa23.4■■□□□ 1.34
SSNA1-202ENST00000459860 BICDL2A1A5D9 508 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 AKAP3O75969 853 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 CYP11A1P05108 521 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 ELF1P32519 619 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 MTHFRP42898 656 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 VAMP7P51809 220 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 FKBP3Q00688 224 aaKnown RBP23.39■■□□□ 1.33
SSNA1-202ENST00000459860 RSPO2Q6UXX9 243 aaPredicted RBP23.39■■□□□ 1.33
SSNA1-202ENST00000459860 TMC5Q6UXY8 1006 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 CCDC149Q6ZUS6 474 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 ALYREFQ86V81 257 aaKnown RBP23.39■■□□□ 1.33
SSNA1-202ENST00000459860 THEM5Q8N1Q8 247 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 EDAQ92838 391 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 KCNH6Q9H252 994 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 ZDHHC7Q9NXF8 308 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 TRIOO75962 3097 aa23.39■■□□□ 1.33
SSNA1-202ENST00000459860 TBC1D4O60343 1298 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 ENPEPQ07075 957 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 ATAT1Q5SQI0 421 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 TPGS2Q68CL5 300 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 ANKRD40Q6AI12 368 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 CYP26C1Q6V0L0 522 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 C15orf39Q6ZRI6 1047 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 CMASQ8NFW8 434 aaPredicted RBP23.38■■□□□ 1.33
SSNA1-202ENST00000459860 ZNF461Q8TAF7 563 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 CXorf38Q8TB03 319 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 PLEKHO2Q8TD55 490 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 SUSD6Q92537 303 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 GDAP2Q9NXN4 497 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 SNX9Q9Y5X1 595 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 C2orf16Q68DN1 1984 aa23.38■■□□□ 1.33
SSNA1-202ENST00000459860 CCDC195A0A1B0GUA6 201 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 WDR27A2RRH5 827 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 IKBKBO14920 756 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 SLC16A3O15427 465 aaKnown RBP23.37■■□□□ 1.33
SSNA1-202ENST00000459860 ZMYND10O75800 440 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 C8AP07357 584 aa23.37■■□□□ 1.33
SSNA1-202ENST00000459860 CLDN10P78369 228 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms