RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 WDFY4Q6ZS81 3184 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 FAM237AA0A1B0GTK4 181 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 ZNF233A6NK53 670 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 KPNA7A9QM74 516 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 CYB561D2O14569 222 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 MYL1P05976 194 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 HTR4Q13639 388 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 SURF1Q15526 300 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 BMT2Q1RMZ1 405 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 HS2ST1Q7LGA3 356 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 METTL23Q86XA0 190 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 GRAMD1CQ8IYS0 662 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 ELMOD1Q8N336 334 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 FGF13Q92913 245 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 PDE11AQ9HCR9 933 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 AGPAT3Q9NRZ7 376 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 CGNQ9P2M7 1197 aaKnown RBP17.4■□□□□ 0.38
COL7A1-203ENST00000459756 ITGA11Q9UKX5 1188 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 TSC2P49815 1807 aa17.4■□□□□ 0.38
COL7A1-203ENST00000459756 TCHHQ07283 1943 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 ITGB3P05106 788 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 RHOP08100 348 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 OR4Q2P0C623 313 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 CBWD2Q8IUF1 395 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 SLC44A3Q8N4M1 653 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 C1orf127Q8N9H9 656 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 RSAD2Q8WXG1 361 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 BORCS6Q96GS4 357 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 SLC39A2Q9NP94 309 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 AGAP1Q9UPQ3 857 aa17.39■□□□□ 0.37
COL7A1-203ENST00000459756 MRPS23Q9Y3D9 190 aaKnown RBP17.39■□□□□ 0.37
COL7A1-203ENST00000459756 ZDBF2Q9HCK1 2354 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 A0A1W2PQ27 194 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 A0A1W2PQ64 194 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 KLRC4O43908 158 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 POLR2BP30876 1174 aaKnown RBP17.38■□□□□ 0.37
COL7A1-203ENST00000459756 ANP32AP39687 249 aaKnown RBP17.38■□□□□ 0.37
COL7A1-203ENST00000459756 SYKP43405 635 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 TWF1Q12792 350 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 PSMD2Q13200 908 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 PLD1Q13393 1074 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 SNRNP35Q16560 246 aaKnown RBP17.38■□□□□ 0.37
COL7A1-203ENST00000459756 KNOP1Q1ED39 458 aaKnown RBP17.38■□□□□ 0.37
COL7A1-203ENST00000459756 IQCEQ6IPM2 695 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 MTSS1LQ765P7 747 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 NPAS3Q8IXF0 933 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 THEM5Q8N1Q8 247 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 CSGALNACT2Q8N6G5 542 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 ZNF512Q96ME7 567 aaPredicted RBP17.38■□□□□ 0.37
COL7A1-203ENST00000459756 PGLYRP2Q96PD5 576 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 CORO1BQ9BR76 489 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 EXOC1Q9NV70 894 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 INTS13Q9NVM9 706 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 GDE1Q9NZC3 331 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 HSFX1Q9UBD0 423 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 NUMBLQ9Y6R0 609 aa17.38■□□□□ 0.37
COL7A1-203ENST00000459756 ZNF197O14709 1029 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 MICAL2O94851 1124 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 VNN2O95498 520 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 TMEM191BP0C7N4 346 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 SRFP11831 508 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 NDUFA8P51970 172 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 RBP5P82980 135 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 DUSP4Q13115 394 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 SLC5A9Q2M3M2 681 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 CYP4A22Q5TCH4 519 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 WSCD1Q658N2 575 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 CENPPQ6IPU0 288 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 C12orf56Q8IXR9 622 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 LEMD2Q8NC56 503 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 OR10T2Q8NGX3 314 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 CXorf38Q8TB03 319 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 GOLGA5Q8TBA6 731 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 ANKRD36BP1Q96IX9 119 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 MTMR12Q9C0I1 747 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 FBXL21Q9UKT6 434 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
COL7A1-203ENST00000459756 YIPF1Q9Y548 306 aa17.37■□□□□ 0.37
COL7A1-203ENST00000459756 MUC6Q6W4X9 2439 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 MTMR11A4FU01 709 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 NARSO43776 548 aaKnown RBP17.36■□□□□ 0.37
COL7A1-203ENST00000459756 PDGFBP01127 241 aaPredicted RBP17.36■□□□□ 0.37
COL7A1-203ENST00000459756 TNNC2P02585 160 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 KRT19P08727 400 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 PLA2G5P39877 138 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 ALDH1A3P47895 512 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 CYP2J2P51589 502 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 NUCB2P80303 420 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 DUOXA2Q1HG44 320 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 KMT5BQ4FZB7 885 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 PRSS36Q5K4E3 855 aa17.36■□□□□ 0.37
COL7A1-203ENST00000459756 PARM1Q6UWI2 310 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms