RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 SYCP1Q15431 976 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 EXOC3L4Q17RC7 722 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 SV2CQ496J9 727 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 FILIP1LQ4L180 1135 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 RTP2Q5QGT7 225 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 FKBP15Q5T1M5 1219 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 PHLDB3Q6NSJ2 640 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 PRSS55Q6UWB4 352 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 GBP6Q6ZN66 633 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 GLYCTKQ8IVS8 523 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 VPS52Q8N1B4 723 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 FBXO22Q8NEZ5 403 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 SPPL3Q8TCT6 385 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 MICAL1Q8TDZ2 1067 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 POF1BQ8WVV4 589 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 ARID3AQ99856 593 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 MRPL45Q9BRJ2 306 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 SDCBP2Q9H190 292 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 SMYD3Q9H7B4 428 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 GCNT4Q9P109 453 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 AJAP1Q9UKB5 411 aaPredicted RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 COQ4Q9Y3A0 265 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 MICAL3Q7RTP6 2002 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 TCF20Q9UGU0 1960 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 A0A1B0GTH6 734 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 EPHB6O15197 1021 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 N4BP1O75113 896 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 CXCL14O95715 111 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ASS1P00966 412 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 PDGFRBP09619 1106 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ACAT1P24752 427 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 LMO2P25791 158 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ATICP31939 592 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ARPP19P56211 112 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 TNNC1P63316 161 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 NOP14P78316 857 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 CETN1Q12798 172 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 CCDC85BQ15834 202 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ARHGAP44Q17R89 818 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 SOWAHAQ2M3V2 549 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 KIAA1841Q6NSI8 718 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 DPY19L2P1Q6NXN4 242 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 TRIM65Q6PJ69 517 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 DDX53Q86TM3 631 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ALYREFQ86V81 257 aaKnown RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 OSTM1Q86WC4 334 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 PPM1KQ8N3J5 372 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 PDCL2Q8N4E4 241 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 LRRC52Q8N7C0 313 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 RIN2Q8WYP3 895 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 ZNF560Q96MR9 790 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 TMEM209Q96SK2 561 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 LRFN3Q9BTN0 628 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 TRIM5Q9C035 493 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 PRDM12Q9H4Q4 367 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 SIX2Q9NPC8 291 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 UBE2TQ9NPD8 197 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 FAM207AQ9NSI2 230 aaPredicted RBP9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 L1RE1Q9UN81 338 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 NME7Q9Y5B8 376 aa9.31□□□□□ -0.92
CLTCL1-204ENST00000458188 PIEZO1Q92508 2521 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 GOLGA6L3A6NEY3 463 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 H3BNC9 293 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 TMEM189-UBE2V1I3L0A0 370 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 M0QZQ0 153 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 P4HA2O15460 535 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 ADAM12O43184 909 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 TRAPPC3O43617 180 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 HUS1O60921 280 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 SOD2P04179 222 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 RB1P06400 928 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 OR4Q2P0C623 313 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PNMA6AP0CW24 399 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PNPLA4P41247 253 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 ASPAP45381 313 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 AARSP49588 968 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PLCB3Q01970 1234 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 CAMK1Q14012 370 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 CCDC142Q17RM4 750 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 AAK1Q2M2I8 961 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 ZNF394Q53GI3 561 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 TMEM31Q5JXX7 168 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PLPP4Q5VZY2 271 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 IQCEQ6IPM2 695 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 RSPO2Q6UXX9 243 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 RBM23Q86U06 439 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 APPL2Q8NEU8 664 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 OR6B3Q8NGW1 331 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 CPLX3Q8WVH0 158 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 SUSD3Q96L08 255 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 KREMEN1Q96MU8 473 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 NT5C1BQ96P26 610 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 TCF25Q9BQ70 676 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms