RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TIMM13Q9Y5L4 95 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-220ENST00000458038 PIAS3Q9Y6X2 628 aa23.38■■□□□ 1.33
CPNE1-220ENST00000458038 A0A0B4J269 797 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 NPHP3-ACAD11A0A0J9YXS1 232 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 FAM189A1O60320 539 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 FAM13AO94988 1023 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 TNFSF9P41273 254 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 VIPR2P41587 438 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 LILRA4P59901 499 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 SPAG1Q07617 926 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 DUSP4Q13115 394 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 TEAD2Q15562 447 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 CENPPQ6IPU0 288 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 ARMCX5Q6P1M9 558 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 GPBP1Q86WP2 473 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 YAF2Q8IY57 180 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 SHKBP1Q8TBC3 707 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 CSGALNACT1Q8TDX6 532 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 TMX3Q96JJ7 454 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 LRRC3Q9BY71 257 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 SMG5Q9UPR3 1016 aaKnown RBP23.37■■□□□ 1.33
CPNE1-220ENST00000458038 DNAH14Q0VDD8 3507 aa23.37■■□□□ 1.33
CPNE1-220ENST00000458038 HEPACAM2A8MVW5 462 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 K7ENM7 598 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 CHADO15335 359 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 ODC1P11926 461 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 GJB2P29033 226 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 CCR3P51677 355 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 CACNB1Q02641 598 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-220ENST00000458038 C8orf34Q49A92 452 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 ITIH5Q86UX2 942 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 PGLYRP2Q96PD5 576 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 MSTO1Q9BUK6 570 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 C8orf33Q9H7E9 229 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-220ENST00000458038 LMAN1LQ9HAT1 526 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 COL4A2P08572 1712 aa23.36■■□□□ 1.33
CPNE1-220ENST00000458038 TRAK2O60296 914 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 VNN2O95498 520 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 GJA1P17302 382 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 LONP1P36776 959 aaKnown RBP23.35■■□□□ 1.33
CPNE1-220ENST00000458038 MCM2P49736 904 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 POU5F1Q01860 360 aaKnown RBP23.35■■□□□ 1.33
CPNE1-220ENST00000458038 FCHO2Q0JRZ9 810 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 TMC8Q8IU68 726 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 PSMG2Q969U7 264 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 SENP8Q96LD8 212 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 DNAJC25Q9H1X3 360 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 CPSF3Q9UKF6 684 aaKnown RBP23.35■■□□□ 1.33
CPNE1-220ENST00000458038 DSEQ9UL01 958 aa23.35■■□□□ 1.33
CPNE1-220ENST00000458038 NCOR2Q9Y618 2525 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 A0A1W2PRU2 124 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 PRR5-ARHGAP8B1AHC4 643 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 ARNTLO00327 626 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 NRG2O14511 850 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-220ENST00000458038 CYP11A1P05108 521 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 KRT18P05783 430 aaKnown RBP23.34■■□□□ 1.33
CPNE1-220ENST00000458038 OR4Q2P0C623 313 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 TUFMP49411 452 aaKnown RBP23.34■■□□□ 1.33
CPNE1-220ENST00000458038 ARHGAP8P85298 464 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 GTF2BQ00403 316 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 SLFN12LQ6IEE8 588 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 TSSK4Q6SA08 328 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 CELF5Q8N6W0 485 aaKnown RBP23.34■■□□□ 1.33
CPNE1-220ENST00000458038 ASB7Q9H672 318 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 OBP2AQ9NY56 170 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 RAB23Q9ULC3 237 aa23.34■■□□□ 1.33
CPNE1-220ENST00000458038 ANK1P16157 1881 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 MTMR11A4FU01 709 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 TBCAO75347 108 aaKnown RBP23.33■■□□□ 1.33
CPNE1-220ENST00000458038 TDGF1P13385 188 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 WEE1P30291 646 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 SMARCB1Q12824 385 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 LRRC32Q14392 662 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 TMEM132DQ14C87 1099 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 ARHGAP15Q53QZ3 475 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 JADE1Q6IE81 842 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 BRAPQ7Z569 592 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 DNAJB7Q7Z6W7 309 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-220ENST00000458038 FAM212AQ96EL1 285 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 CRISPLD1Q9H336 500 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 BLOC1S4Q9NUP1 217 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 ZMYM5Q9UJ78 669 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 SMC3Q9UQE7 1217 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 C2CD2Q9Y426 696 aa23.33■■□□□ 1.33
CPNE1-220ENST00000458038 ANO9A1A5B4 782 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 PIRO00625 290 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 DPYSL4O14531 572 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 CHRNB1P11230 501 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 CCNE1P24864 410 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 CXCL12P48061 93 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 GUCY2FP51841 1108 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 LMNB2Q03252 620 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 DHX8Q14562 1220 aaKnown RBP23.32■■□□□ 1.32
CPNE1-220ENST00000458038 RSPO4Q2I0M5 234 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-220ENST00000458038 ARHGAP29Q52LW3 1261 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 C9orf57Q5W0N0 161 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 LARP1BQ659C4 914 aaKnown RBP23.32■■□□□ 1.32
CPNE1-220ENST00000458038 ARID3BQ8IVW6 561 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-220ENST00000458038 SPEM1Q8N4L4 309 aa23.32■■□□□ 1.32
CPNE1-220ENST00000458038 ATAD1Q8NBU5 361 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms