RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PCDHA13Q9Y5I0 950 aa9.37□□□□□ -0.91
RIF1-208ENST00000457745 FNDC1Q4ZHG4 1894 aaPredicted RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 MYH10P35580 1976 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 PIRO00625 290 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 GPR182O15218 404 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 AKR1B10O60218 316 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 CAND2O75155 1236 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 OFD1O75665 1012 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 ITGB1P05556 798 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 ITGA4P13612 1032 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 KRT5P13647 590 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 EN2P19622 333 aaPredicted RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 VAV2P52735 878 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 RAD23BP54727 409 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 MFAP3P55082 362 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 POU5F1Q01860 360 aaKnown RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 PCBP1Q15365 356 aaKnown RBP eCLIP9.36□□□□□ -0.91
RIF1-208ENST00000457745 SURF1Q15526 300 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 SLC18A3Q16572 532 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 ZNF394Q53GI3 561 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 C2CD6Q53TS8 623 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 PLEKHG4Q58EX7 1191 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 TMEM270Q6UE05 265 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 LRRN4CLQ8ND94 238 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 KBTBD7Q8WVZ9 684 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 JAKMIP2Q96AA8 810 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 HPDLQ96IR7 371 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 CCDC42Q96M95 316 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 IFIH1Q9BYX4 1025 aaKnown RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
RIF1-208ENST00000457745 GOLPH3Q9H4A6 298 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 CISHQ9NSE2 258 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 TJP2Q9UDY2 1190 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 NAGPAQ9UK23 515 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 PCDHB4Q9Y5E5 795 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 CAPN6Q9Y6Q1 641 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 VWA8A3KMH1 1905 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 TTC3P53804 2025 aa9.36□□□□□ -0.91
RIF1-208ENST00000457745 A0A0U1RQF3 1178 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 CASTOR2A6NHX0 329 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 I3L4J1 428 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 ENPP3O14638 875 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 ZNF623O75123 536 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 DDHD2O94830 711 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 MOCS3O95396 460 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 GJB6O95452 261 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 POMCP01189 267 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 CXCL10P02778 98 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 CCDC175P0C221 793 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 RFX1P22670 979 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 MAGEA1P43355 309 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 AP3M2P53677 418 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 FAM189BP81408 668 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 TRPC3Q13507 836 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 SOWAHAQ2M3V2 549 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 PAN2Q504Q3 1202 aaKnown RBP9.35□□□□□ -0.91
RIF1-208ENST00000457745 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 DENND1BQ6P3S1 775 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 SYT10Q6XYQ8 523 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
RIF1-208ENST00000457745 LIMS2Q7Z4I7 341 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 DEFB128Q7Z7B8 93 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 PHLDB2Q86SQ0 1253 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 ZNF280BQ86YH2 543 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 PASD1Q8IV76 773 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 CCDC170Q8IYT3 715 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 SLC4A11Q8NBS3 891 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 CAGE1Q8TC20 777 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.35□□□□□ -0.91
RIF1-208ENST00000457745 TRAIPQ9BWF2 469 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 HIPK3Q9H422 1215 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 CHST12Q9NRB3 414 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 RGS18Q9NS28 235 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 ZNHIT6Q9NWK9 470 aaKnown RBP9.35□□□□□ -0.91
RIF1-208ENST00000457745 CYTH4Q9UIA0 394 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 L1RE1Q9UN81 338 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 COG5Q9UP83 839 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 INPP5FQ9Y2H2 1132 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 DERAQ9Y315 318 aa9.35□□□□□ -0.91
RIF1-208ENST00000457745 KIAA1671Q9BY89 1806 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 PJA2O43164 708 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 CILPO75339 1184 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
RIF1-208ENST00000457745 TNNT1P13805 278 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 LMO2P25791 158 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 LRPAP1P30533 357 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 CYLC1P35663 651 aaPredicted RBP9.34□□□□□ -0.91
RIF1-208ENST00000457745 BRCC3P46736 316 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 CLCNKBP51801 687 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 YARSP54577 528 aaKnown RBP9.34□□□□□ -0.91
RIF1-208ENST00000457745 GALCP54803 685 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms