RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SP100P23497 879 aaPredicted RBP24.99■■□□□ 1.59
CBX3-204ENST00000456948 POLR2BP30876 1174 aaKnown RBP24.99■■□□□ 1.59
CBX3-204ENST00000456948 MYBPC2Q14324 1141 aa24.99■■□□□ 1.59
CBX3-204ENST00000456948 RSPO2Q6UXX9 243 aaPredicted RBP24.99■■□□□ 1.59
CBX3-204ENST00000456948 ZDHHC14Q8IZN3 488 aa24.99■■□□□ 1.59
CBX3-204ENST00000456948 LRRC52Q8N7C0 313 aa24.99■■□□□ 1.59
CBX3-204ENST00000456948 CYP4F11Q9HBI6 524 aa24.99■■□□□ 1.59
CBX3-204ENST00000456948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.99■■□□□ 1.59
CBX3-204ENST00000456948 AFF4Q9UHB7 1163 aaKnown RBP24.99■■□□□ 1.59
CBX3-204ENST00000456948 CDH22Q9UJ99 828 aa24.99■■□□□ 1.59
CBX3-204ENST00000456948 WDR27A2RRH5 827 aa24.98■■□□□ 1.59
CBX3-204ENST00000456948 PPEF2O14830 753 aa24.98■■□□□ 1.59
CBX3-204ENST00000456948 CYP11A1P05108 521 aa24.98■■□□□ 1.59
CBX3-204ENST00000456948 TCEAL8Q8IYN2 117 aa24.98■■□□□ 1.59
CBX3-204ENST00000456948 ELMOD1Q8N336 334 aa24.98■■□□□ 1.59
CBX3-204ENST00000456948 ZNF707Q96C28 371 aaPredicted RBP24.98■■□□□ 1.59
CBX3-204ENST00000456948 CLUHO75153 1309 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 KINO60870 393 aaKnown RBP24.97■■□□□ 1.59
CBX3-204ENST00000456948 GPR37L1O60883 481 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 HUS1O60921 280 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 PRR29P0C7W0 189 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 DLATP10515 647 aaKnown RBP24.97■■□□□ 1.59
CBX3-204ENST00000456948 CYP24A1Q07973 514 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 PSMD6Q15008 389 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 SLC9A9Q8IVB4 645 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 C1orf127Q8N9H9 656 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 TMEM174Q8WUU8 243 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 CCDC127Q96BQ5 260 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 GSDMAQ96QA5 445 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 MTMR12Q9C0I1 747 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 C11orf16Q9NQ32 467 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 MUTYHQ9UIF7 546 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 FRMD4BQ9Y2L6 1034 aa24.97■■□□□ 1.59
CBX3-204ENST00000456948 C2CD4DB7Z1M9 353 aa24.96■■□□□ 1.59
CBX3-204ENST00000456948 SPTLC1O15269 473 aa24.96■■□□□ 1.59
CBX3-204ENST00000456948 CCL16O15467 120 aa24.96■■□□□ 1.59
CBX3-204ENST00000456948 RPL13P26373 211 aaKnown RBP24.96■■□□□ 1.59
CBX3-204ENST00000456948 GBP2P32456 591 aaPredicted RBP24.96■■□□□ 1.59
CBX3-204ENST00000456948 AP3M2P53677 418 aa24.96■■□□□ 1.59
CBX3-204ENST00000456948 PLD1Q13393 1074 aa24.96■■□□□ 1.59
CBX3-204ENST00000456948 TMEM130Q8N3G9 435 aa24.96■■□□□ 1.59
CBX3-204ENST00000456948 GUF1Q8N442 669 aaKnown RBP24.96■■□□□ 1.59
CBX3-204ENST00000456948 ZFP37Q9Y6Q3 630 aaPredicted RBP24.96■■□□□ 1.59
CBX3-204ENST00000456948 ADCY1Q08828 1119 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 SMARCB1Q12824 385 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 BFSP1Q12934 665 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 GPR17Q13304 367 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 SNW1Q13573 536 aaKnown RBP24.95■■□□□ 1.58
CBX3-204ENST00000456948 IQCEQ6IPM2 695 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 TMEM86AQ8N2M4 240 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 ENGASEQ8NFI3 743 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 SMARCE1Q969G3 411 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 MFSD14AQ96MC6 490 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 CGRRF1Q99675 332 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 KCTD10Q9H3F6 313 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 SCN1AP35498 2009 aa24.95■■□□□ 1.58
CBX3-204ENST00000456948 NR3C1P04150 777 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 PTPN2P17706 415 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 FSHRP23945 695 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 WNT7BP56706 349 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 TRPC3Q13507 836 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 PNOCQ13519 176 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 GRASPQ7Z6J2 395 aaPredicted RBP24.94■■□□□ 1.58
CBX3-204ENST00000456948 ELOA2Q8IYF1 753 aaPredicted RBP24.94■■□□□ 1.58
CBX3-204ENST00000456948 SPATA18Q8TC71 538 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 LIMD1Q9UGP4 676 aa24.94■■□□□ 1.58
CBX3-204ENST00000456948 C2orf16Q68DN1 1984 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 PHACTR2O75167 634 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 TSPY1Q01534 308 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 LMBRD2Q68DH5 695 aaPredicted RBP24.93■■□□□ 1.58
CBX3-204ENST00000456948 DPH6Q7L8W6 267 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 TRAPPC11Q7Z392 1133 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 DCP1BQ8IZD4 617 aaKnown RBP24.93■■□□□ 1.58
CBX3-204ENST00000456948 HPDLQ96IR7 371 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 ZNF512Q96ME7 567 aaPredicted RBP24.93■■□□□ 1.58
CBX3-204ENST00000456948 DMAC2Q9NW81 257 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 GDAP2Q9NXN4 497 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 TRAF3IP3Q9Y228 551 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 SNX9Q9Y5X1 595 aa24.93■■□□□ 1.58
CBX3-204ENST00000456948 ALDH1A3P47895 512 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 MYL7Q01449 175 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 MTMR3Q13615 1198 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 PTPN21Q16825 1174 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 PABPC1LQ4VXU2 614 aaKnown RBP24.92■■□□□ 1.58
CBX3-204ENST00000456948 WSCD1Q658N2 575 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 CEP135Q66GS9 1140 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 RNF19BQ6ZMZ0 732 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 GET4Q7L5D6 327 aaPredicted RBP24.92■■□□□ 1.58
CBX3-204ENST00000456948 UBALD2Q8IYN6 164 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 TOP6BLQ8N6T0 577 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 OR5B17Q8NGF7 314 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 C2orf15Q8WU43 125 aaKnown RBP24.92■■□□□ 1.58
CBX3-204ENST00000456948 EDAQ92838 391 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 NXPE3Q969Y0 559 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 BORCS6Q96GS4 357 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 IGSF9Q9P2J2 1179 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 HSFX1Q9UBD0 423 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 SORCS3Q9UPU3 1222 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 MAPK8IP1Q9UQF2 711 aa24.92■■□□□ 1.58
CBX3-204ENST00000456948 INSL5Q9Y5Q6 135 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms