RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 MRPL45Q9BRJ2 306 aaKnown RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 SMYD3Q9H7B4 428 aa15.12■□□□□ 0.01
TIMP1-205ENST00000456754 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.12■□□□□ 0.01
TIMP1-205ENST00000456754 LINC01565O15544 149 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 CLSTN1O94985 981 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 AFPP02771 609 aaKnown RBP15.11■□□□□ 0.01
TIMP1-205ENST00000456754 OR4Q2P0C623 313 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 GTF2H1P32780 548 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 NRIP1P48552 1158 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 AP3M2P53677 418 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 CDH8P55286 799 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 ENPEPQ07075 957 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
TIMP1-205ENST00000456754 PSMD5Q16401 504 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 SOWAHAQ2M3V2 549 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 WDR72Q3MJ13 1102 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 KIAA1841Q6NSI8 718 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 LRSAM1Q6UWE0 723 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 KLHL5Q96PQ7 755 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 LPIN3Q9BQK8 851 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 CRACR2AQ9BSW2 395 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 LMAN2LQ9H0V9 348 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 TSPY26PQ9H489 355 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 IGFLR1Q9H665 355 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 BRWD1Q9NSI6 2320 aa15.11■□□□□ 0.01
TIMP1-205ENST00000456754 TEX28O15482 410 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 CLASP2O75122 1294 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 ASS1P00966 412 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 SPATA31D3P0C874 917 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 PRKCSHP14314 528 aaPredicted RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 ACAT1P24752 427 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 PNPLA4P41247 253 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 HYAL1Q12794 435 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 MRPL58Q14197 206 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 PTPROQ16827 1216 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 LLGL2Q6P1M3 1020 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 SPATA31D4Q6ZUB0 917 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 APTXQ7Z2E3 356 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 USP37Q86T82 979 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 RNF214Q8ND24 703 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 FBXL13Q8NEE6 735 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 OR10T2Q8NGX3 314 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 LMO3Q8TAP4 145 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 KBTBD7Q8WVZ9 684 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 PIK3R5Q8WYR1 880 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 ARID3AQ99856 593 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 CLSTN3Q9BQT9 956 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 TUBGCP2Q9BSJ2 902 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 NAT10Q9H0A0 1025 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 VPS16Q9H269 839 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 NSUN3Q9H649 340 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 MRPL17Q9NRX2 175 aaKnown RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 RAB20Q9NX57 234 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 GDAP2Q9NXN4 497 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 MAGEC2Q9UBF1 373 aaPredicted RBP15.1■□□□□ 0.01
TIMP1-205ENST00000456754 EYSQ5T1H1 3165 aa15.1■□□□□ 0.01
TIMP1-205ENST00000456754 SYN3O14994 580 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ODC1P11926 461 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 POU3F3P20264 500 aaPredicted RBP15.09■□□□□ 0.01
TIMP1-205ENST00000456754 LMO2P25791 158 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ASPAP45381 313 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ARPP19P56211 112 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ZNF445P59923 1031 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ELAVL2Q12926 359 aaKnown RBP15.09■□□□□ 0.01
TIMP1-205ENST00000456754 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ORC1Q13415 861 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 MAN2A1Q16706 1144 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 VWA3BQ502W6 1294 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 GJB7Q6PEY0 223 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 LIMS2Q7Z4I7 341 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 GAS2L3Q86XJ1 694 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 ARHGEF19Q8IW93 802 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 FAM114A1Q8IWE2 563 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 KAT5Q92993 513 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 MMS19Q96T76 1030 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 RXFP1Q9HBX9 757 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 NGRNQ9NPE2 291 aaKnown RBP15.09■□□□□ 0.01
TIMP1-205ENST00000456754 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 HMGXB4Q9UGU5 601 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 FBXL5Q9UKA1 691 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 COQ4Q9Y3A0 265 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.09■□□□□ 0.01
TIMP1-205ENST00000456754 CDY1Q9Y6F8 540 aa15.09■□□□□ 0.01
TIMP1-205ENST00000456754 CARNS1A5YM72 827 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 TBC1D4O60343 1298 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 STX10O60499 249 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 VNN2O95498 520 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 GLP2RO95838 553 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 CYP11A1P05108 521 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 EPCAMP16422 314 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 SLC9A1P19634 815 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 TYMPP19971 482 aa15.08■□□□□ 0
TIMP1-205ENST00000456754 EEF1GP26641 437 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms