RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
LDLR-202ENST00000455727 FAXDC2Q96IV6 333 aa16■□□□□ 0.15
LDLR-202ENST00000455727 OSBPL8Q9BZF1 889 aa16■□□□□ 0.15
LDLR-202ENST00000455727 ROPN1BQ9BZX4 212 aaPredicted RBP16■□□□□ 0.15
LDLR-202ENST00000455727 RABEP2Q9H5N1 569 aa16■□□□□ 0.15
LDLR-202ENST00000455727 ROPN1Q9HAT0 212 aaPredicted RBP16■□□□□ 0.15
LDLR-202ENST00000455727 FAM169AQ9Y6X4 670 aa16■□□□□ 0.15
LDLR-202ENST00000455727 GMNCA6NCL1 334 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 EIF4BP23588 611 aaKnown RBP15.99■□□□□ 0.15
LDLR-202ENST00000455727 CETN2P41208 172 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 TAP1Q03518 808 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 SNX1Q13596 522 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 RHPN2Q8IUC4 686 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 TMEM35BQ8NCS4 154 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 NFKBIZQ9BYH8 718 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 ASIC3Q9UHC3 531 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 NEU2Q9Y3R4 380 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 UTRNP46939 3433 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 MGAMO43451 1857 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 AGTP01019 485 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 MAGEA9P43362 315 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 SEC24CP53992 1094 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
LDLR-202ENST00000455727 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 TNFAIP8L3Q5GJ75 292 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 ATF7IP2Q5U623 682 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 CCDC50Q8IVM0 306 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 RCOR2Q8IZ40 523 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 ATG4AQ8WYN0 398 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 STMN4Q9H169 189 aaPredicted RBP15.99■□□□□ 0.15
LDLR-202ENST00000455727 XYLT2Q9H1B5 865 aa15.99■□□□□ 0.15
LDLR-202ENST00000455727 EVPLQ92817 2033 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 E7EVH7 732 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 TNNC2P02585 160 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 LLGL1Q15334 1064 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 MICALCLQ6ZW33 695 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 BBOF1Q8ND07 529 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 FAM212AQ96EL1 285 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 RBM41Q96IZ5 413 aaKnown RBP15.98■□□□□ 0.15
LDLR-202ENST00000455727 TRAIPQ9BWF2 469 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 RASSF4Q9H2L5 321 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 AAASQ9NRG9 546 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 TNFSF13BQ9Y275 285 aa15.98■□□□□ 0.15
LDLR-202ENST00000455727 O00370 1275 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 TRIM66O15016 1216 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 RGS16O15492 202 aaPredicted RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 IL18RAPO95256 599 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 TXNP10599 105 aaKnown RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 FGFR4P22455 802 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 TMOD1P28289 359 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 SSTR3P32745 418 aaPredicted RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 MMP13P45452 471 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 RPL7AP62424 266 aaKnown RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 TFAMQ00059 246 aaKnown RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 TTLL4Q14679 1199 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 MFSD5Q6N075 450 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 C10orf67Q8IYJ2 551 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 CCDC89Q8N998 374 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 SHCBP1Q8NEM2 672 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 ANKRD36BP1Q96IX9 119 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 PPANQ9NQ55 473 aaKnown RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 R3HDM2Q9Y2K5 976 aaKnown RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 ASPAP45381 313 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 COPS2P61201 443 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 LMNB2Q03252 620 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 ZNF699Q32M78 642 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 PPP1R15BQ5SWA1 713 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 DAB2IPQ5VWQ8 1189 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 EFCAB12Q6NXP0 572 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 FBXO16Q8IX29 292 aaPredicted RBP15.97■□□□□ 0.15
LDLR-202ENST00000455727 CDCA5Q96FF9 252 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 SCLT1Q96NL6 688 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 HEMGNQ9BXL5 484 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 USTQ9Y2C2 406 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 CEP83Q9Y592 693 aa15.97■□□□□ 0.15
LDLR-202ENST00000455727 ZSWIM8A7E2V4 1837 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 A0A087WUV0 522 aaPredicted RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 ASB14A6NK59 587 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 INO80B-WBP1J3KQ70 363 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 ATF2P15336 505 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 CD58P19256 250 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 MBTD1Q05BQ5 628 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 NFX1Q12986 1120 aaKnown RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 PIGHQ14442 188 aaPredicted RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 FAM187BQ17R55 369 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 GPAT2Q6NUI2 795 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 DRICH1Q6PGQ1 229 aaPredicted RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 ARMC9Q7Z3E5 817 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 YTHDF3Q7Z739 585 aaKnown RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 WDTC1Q8N5D0 677 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 NIPA2Q8N8Q9 360 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 RAPGEF5Q92565 580 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 INO80BQ9C086 356 aaPredicted RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 CDC42EP4Q9H3Q1 356 aaKnown RBP15.96■□□□□ 0.15
LDLR-202ENST00000455727 ERAP1Q9NZ08 941 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 TLDC2A0PJX2 215 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 RASGRF2O14827 1237 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 PTPN7P35236 360 aa15.96■□□□□ 0.15
LDLR-202ENST00000455727 ITGA8P53708 1063 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms