RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 BSNDQ8WZ55 320 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 PMEPA1Q969W9 287 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 NECTIN4Q96NY8 510 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 NAP1L4Q99733 375 aaKnown RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 TMEM175Q9BSA9 504 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 EMILIN2Q9BXX0 1053 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 TRIM6Q9C030 488 aaPredicted RBP5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 RASSF4Q9H2L5 321 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 LIN7BQ9HAP6 207 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 ANKEF1Q9NU02 776 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 KLF15Q9UIH9 416 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 NAGPAQ9UK23 515 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 SORCS3Q9UPU3 1222 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 DENND4AQ7Z401 1863 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 CITO14578 2027 aa5.19□□□□□ -1.58
GTF3C3-208ENST00000455546 WDFY4Q6ZS81 3184 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 A0A1B0GUA9 196 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CASTOR2A6NHX0 329 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 TERTO14746 1132 aaKnown RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 INPPL1O15357 1258 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 TGM5O43548 720 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 PI15O43692 258 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 NARSO43776 548 aaKnown RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 FBXO24O75426 580 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 TADA2AO75478 443 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 KIF4AO95239 1232 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 LYPLA2O95372 231 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 EFEMP2O95967 443 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 GHRHP01286 108 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 SOD2P04179 222 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 EDN1P05305 212 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 URODP06132 367 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 XRCC6P12956 609 aaKnown RBP eCLIP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CDC25AP30304 524 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 AXLP30530 894 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 SOX18P35713 384 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 NRLP54845 237 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 GPLD1P80108 840 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 POU5F1BQ06416 359 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 DSC1Q08554 894 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 NCBP1Q09161 790 aaKnown RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 EEF1DP3Q658K8 133 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 KIAA1841Q6NSI8 718 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 FUT10Q6P4F1 479 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 PRSS55Q6UWB4 352 aaPredicted RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 PPFIBP1Q86W92 1011 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CEP57Q86XR8 500 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 NOSTRINQ8IVI9 506 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 ZDHHC14Q8IZN3 488 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 TMEM105Q8N8V8 129 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 TDRD5Q8NAT2 981 aaKnown RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CNNM3Q8NE01 707 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 GLIS3Q8NEA6 775 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 RIN2Q8WYP3 895 aaPredicted RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 ATOH1Q92858 354 aaPredicted RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 C8orf76Q96K31 380 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 SPACA7Q96KW9 195 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC43Q96MW1 224 aaKnown RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 NACC1Q96RE7 527 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 RPS6KC1Q96S38 1066 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 KIFC3Q9BVG8 833 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 COLEC11Q9BWP8 271 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 OXCT2Q9BYC2 517 aaPredicted RBP5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 KCNH6Q9H252 994 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 SFXN1Q9H9B4 322 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 KCNK12Q9HB15 430 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 UBN1Q9NPG3 1134 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 MAN1C1Q9NR34 630 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 IGSF5Q9NSI5 407 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 SNTG2Q9NY99 539 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 SLC6A14Q9UN76 642 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 GIT1Q9Y2X7 761 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 PPME1Q9Y570 386 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 ATG2BQ96BY7 2078 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CNTNAP2Q9UHC6 1331 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 CACNA1HO95180 2353 aa5.18□□□□□ -1.58
GTF3C3-208ENST00000455546 ANK1P16157 1881 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 TRIOO75962 3097 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 MYH15Q9Y2K3 1946 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 ADAM12O43184 909 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 GLUD1P00367 558 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 CYP11B2P19099 503 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 GBP2P32456 591 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 ADH7P40394 386 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 GRIA4P48058 902 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 GLUD2P49448 558 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 TOB1P50616 345 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 OSTNP61366 133 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 NTHL1P78549 312 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 DSG1Q02413 1049 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 PRPF4BQ13523 1007 aaKnown RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 SAFBQ15424 915 aaKnown RBP eCLIP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 IL17AQ16552 155 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 SPRED3Q2MJR0 410 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 GLRA4Q5JXX5 417 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 RTP2Q5QGT7 225 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 TTC38Q5R3I4 469 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 NT5DC1Q5TFE4 455 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM171A1Q5VUB5 890 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms