RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SCARA5Q6ZMJ2 495 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 CACNA2D4Q7Z3S7 1137 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 COLGALT1Q8NBJ5 622 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 SPC24Q8NBT2 197 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 HASPINQ8TF76 798 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 SDCBP2Q9H190 292 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 PRO3102Q9H379 93 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 SMYD3Q9H7B4 428 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 L1RE1Q9UN81 338 aa17.77■□□□□ 0.44
CCDC90B-202ENST00000455220 LAMA3Q16787 3333 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 F8VZ95 297 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 CYB561D2O14569 222 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 MFAP3LO75121 409 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 TACC1O75410 805 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 TPM1P09493 284 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 BRCC3P46736 316 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 RABGGTBP53611 331 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 INCA1Q0VD86 236 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 RAPGEF1Q13905 1077 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 DRAP1Q14919 205 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 SPOUT1Q5T280 376 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 SLC39A11Q8N1S5 342 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 BCL7CQ8WUZ0 217 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 IGSF21Q96ID5 467 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 CNTN6Q9UQ52 1028 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 LUC7L2Q9Y383 392 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 PCDHA11Q9Y5I1 949 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 TSC2P49815 1807 aa17.76■□□□□ 0.43
CCDC90B-202ENST00000455220 NT5C1B-RDH14C9J2C7 533 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 TRAPPC3O43617 180 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 HUS1O60921 280 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 TADA2AO75478 443 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 SF3B1O75533 1304 aaKnown RBP eCLIP17.75■□□□□ 0.438e-6■■■■■ 107
CCDC90B-202ENST00000455220 CYP11A1P05108 521 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 WEE2P0C1S8 567 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 YWHAEP62258 255 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 ARHGAP44Q17R89 818 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 PDXDC1Q6P996 788 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 DSTYKQ6XUX3 929 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 CNGA4Q8IV77 575 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 RNF168Q8IYW5 571 aaPredicted RBP17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 TDHQ8IZJ6 230 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 TTC39CQ8N584 583 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 APPL2Q8NEU8 664 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 SPATA18Q8TC71 538 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 CPLX3Q8WVH0 158 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 KBTBD7Q8WVZ9 684 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 SPAG5Q96R06 1193 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 MMS19Q96T76 1030 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 CISHQ9NSE2 258 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 PCDHB8Q9UN66 801 aa17.75■□□□□ 0.43
CCDC90B-202ENST00000455220 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 ARHGEF37A1IGU5 675 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 LINC01553A4QN01 128 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 LRRC53A6NM62 1247 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 AKR1B15C9JRZ8 316 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 FOXN3O00409 490 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 ODC1P11926 461 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 TYMPP19971 482 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 KRT9P35527 623 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 PPM1AP35813 382 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 RAP1GAPP47736 663 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 CDH8P55286 799 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 CCDC173Q0VFZ6 552 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 FUT10Q6P4F1 479 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 FAM71AQ8IYT1 594 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 TMEM86AQ8N2M4 240 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 PDCL2Q8N4E4 241 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 ZNF397Q8NF99 534 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 PPP1R9BQ96SB3 815 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 DNAJC7Q99615 494 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 NUCKS1Q9H1E3 243 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 NLRC5Q86WI3 1866 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 GOLGA6L6A8MZA4 724 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 I3L4J1 428 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 GABRDO14764 452 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 SYN3O14994 580 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 CILPO75339 1184 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 WARSP23381 471 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 SOX5P35711 763 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 STAT1P42224 750 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 ADGRF2Q8IZF7 708 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 SYN2Q92777 582 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 MRPL45Q9BRJ2 306 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 SPG21Q9NZD8 308 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 DSEQ9UL01 958 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 RWDD3Q9Y3V2 267 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 PCDHB12Q9Y5F1 795 aa17.74■□□□□ 0.43
CCDC90B-202ENST00000455220 MYOGP15173 224 aa17.73■□□□□ 0.43
CCDC90B-202ENST00000455220 CD58P19256 250 aa17.73■□□□□ 0.43
CCDC90B-202ENST00000455220 FGFR3P22607 806 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms