RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 VPS41P49754 854 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 GRIK4Q16099 956 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 UAP1Q16222 522 aaPredicted RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 KAZNQ674X7 775 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 TRIM72Q6ZMU5 477 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 KIAA0319LQ8IZA0 1049 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 C1orf127Q8N9H9 656 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 FBXO25Q8TCJ0 367 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 GTF3C2Q8WUA4 911 aaPredicted RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 LRRC45Q96CN5 670 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 PLVAPQ9BX97 442 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 MRPL47Q9HD33 250 aaKnown RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 GOLGA8KD6RF30 607 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 MAGEB2O15479 319 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 TCF4P15884 667 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 UHMK1Q8TAS1 419 aaKnown RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 PDZD7Q9H5P4 517 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 SIX4Q9UIU6 781 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 CEP350Q5VT06 3117 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 ZEB2O60315 1214 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 B4GALT4O60513 344 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 PROSCO94903 275 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 COILP38432 576 aaPredicted RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 RPL21P46778 160 aaKnown RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 DHX34Q14147 1143 aaKnown RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 CLUL1Q15846 466 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 LEKR1Q6ZMV7 388 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 ANKRD23Q86SG2 305 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 CCDC114Q96M63 670 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 SH3GL2Q99962 352 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 CHST7Q9NS84 486 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 PARVAQ9NVD7 372 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 CNTN6Q9UQ52 1028 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 GOLGA6L10A6NI86 522 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 MMP3P08254 477 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 RALAP11233 206 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 HSPA6P17066 643 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 HPDP32754 393 aaPredicted RBP12.51□□□□□ -0.41
VTA1-203ENST00000452973 PTGIRP43119 386 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 GRM1Q13255 1194 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 TMC3Q7Z5M5 1100 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 TMEM35BQ8NCS4 154 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 FEZF2Q8TBJ5 459 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 AGAP1Q9UPQ3 857 aa12.51□□□□□ -0.41
VTA1-203ENST00000452973 SIP14410 1827 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 F8VP50 259 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 PIK3R2O00459 728 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 MMP8P22894 467 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 POLR2BP30876 1174 aaKnown RBP12.5□□□□□ -0.41
VTA1-203ENST00000452973 ZNF132P52740 706 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 AMHR2Q16671 573 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 DGKDQ16760 1214 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 SLC10A6Q3KNW5 377 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 DNAJC24Q6P3W2 148 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 PHF13Q86YI8 300 aaPredicted RBP12.5□□□□□ -0.41
VTA1-203ENST00000452973 MREGQ8N565 214 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 HES2Q9Y543 173 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 FAM187AA6NFU0 413 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 SMIM23A6NLE4 172 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
VTA1-203ENST00000452973 SLC1A1P43005 524 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 HUNKP57058 714 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 IFFO1Q0D2I5 559 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 DUSP28Q4G0W2 176 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 ODF2Q5BJF6 829 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 MARCH8Q5T0T0 291 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 PLEKHA7Q6IQ23 1121 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 WDTC1Q8N5D0 677 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 CXCL16Q9H2A7 254 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 R3HDM2Q9Y2K5 976 aaKnown RBP12.5□□□□□ -0.41
VTA1-203ENST00000452973 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 SCINQ9Y6U3 715 aa12.5□□□□□ -0.41
VTA1-203ENST00000452973 IL18RAPO95256 599 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 KRT10P13645 584 aa12.49□□□□□ -0.41
VTA1-203ENST00000452973 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms