RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 KCNA1Q09470 495 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 HTR4Q13639 388 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 KYAT1Q16773 422 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 LIAT1Q6ZQX7 453 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 ZNF720Q7Z2F6 126 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 USP37Q86T82 979 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 SYCP3Q8IZU3 236 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 SLC44A3Q8N4M1 653 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 APPL2Q8NEU8 664 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 BEST2Q8NFU1 509 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 ZNF461Q8TAF7 563 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 SNX21Q969T3 373 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 DNAJC19Q96DA6 116 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 SAAL1Q96ER3 474 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
RFX3-209ENST00000451859 PGLYRP2Q96PD5 576 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 RPP25Q9BUL9 199 aaKnown RBP9.41□□□□□ -0.9
RFX3-209ENST00000451859 FGFBP2Q9BYJ0 223 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 KCNH6Q9H252 994 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 PLEKHA5Q9HAU0 1116 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
RFX3-209ENST00000451859 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.41□□□□□ -0.9
RFX3-209ENST00000451859 DNMT3BQ9UBC3 853 aaKnown RBP9.41□□□□□ -0.9
RFX3-209ENST00000451859 CPSF3Q9UKF6 684 aaKnown RBP9.41□□□□□ -0.9
RFX3-209ENST00000451859 CDH7Q9ULB5 785 aa9.41□□□□□ -0.9
RFX3-209ENST00000451859 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
RFX3-209ENST00000451859 CACNA1IQ9P0X4 2223 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 PIEZO1Q92508 2521 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 ATG2BQ96BY7 2078 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 GOLGA8IPA6NC78 632 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 GOLGA8JA6NMD2 632 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 H0Y858 1186 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 GDF9O60383 454 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 PRPF6O94906 941 aaKnown RBP9.4□□□□□ -0.9
RFX3-209ENST00000451859 RHOP08100 348 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 ODC1P11926 461 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 CEBPBP17676 345 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 SCP2P22307 547 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 LRPAP1P30533 357 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 NASPP49321 788 aaPredicted RBP9.4□□□□□ -0.9
RFX3-209ENST00000451859 CASP5P51878 434 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 ADCY1Q08828 1119 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 TCF15Q12870 199 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 PKP1Q13835 747 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 ZBTB6Q15916 424 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 SPATA1Q5VX52 437 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 CWF19L1Q69YN2 538 aaKnown RBP9.4□□□□□ -0.9
RFX3-209ENST00000451859 SLFN12LQ6IEE8 588 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 SLC8B1Q6J4K2 584 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 BLOC1S3Q6QNY0 202 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 PARM1Q6UWI2 310 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 NPAS3Q8IXF0 933 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 LINC00301Q8NCQ3 95 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 ZSWIM2Q8NEG5 633 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 GPR152Q8TDT2 470 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 FGF14Q92915 247 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 HPS3Q969F9 1004 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 DHX58Q96C10 678 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 HVCN1Q96D96 273 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 FAM84AQ96KN4 292 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 ACCSQ96QU6 501 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 FAM213AQ9BRX8 229 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 PANK4Q9NVE7 773 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 SEL1LQ9UBV2 794 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 EXOC7Q9UPT5 735 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 INSL5Q9Y5Q6 135 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 PTPRDP23468 1912 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 GREB1Q4ZG55 1949 aa9.4□□□□□ -0.9
RFX3-209ENST00000451859 USP34Q70CQ2 3546 aa9.4□□□□□ -0.91
RFX3-209ENST00000451859 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 ANAPC1Q9H1A4 1944 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 KRBA1A5PL33 1030 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 M0QZQ0 153 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 SPTLC1O15269 473 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 PI15O43692 258 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 TBC1D4O60343 1298 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 ABLIM3O94929 683 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 PAPLNO95428 1278 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 ZSCAN22P10073 491 aaPredicted RBP9.39□□□□□ -0.91
RFX3-209ENST00000451859 SRFP11831 508 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 MYL4P12829 197 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 ATF2P15336 505 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 GJA1P17302 382 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 PTPN2P17706 415 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 CYP3A5P20815 502 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 ABCD1P33897 745 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 MRE11P49959 708 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 ASIC1P78348 528 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 TFAMQ00059 246 aaKnown RBP9.39□□□□□ -0.91
RFX3-209ENST00000451859 TWF1Q12792 350 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 MRPL58Q14197 206 aaKnown RBP9.39□□□□□ -0.91
RFX3-209ENST00000451859 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 L1TD1Q5T7N2 865 aaKnown RBP9.39□□□□□ -0.91
RFX3-209ENST00000451859 C9orf57Q5W0N0 161 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 OVOS1Q6IE37 1185 aa9.39□□□□□ -0.91
RFX3-209ENST00000451859 CD302Q8IX05 232 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms