RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 C1orf127Q8N9H9 656 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 SPATA18Q8TC71 538 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 TMC2Q8TDI7 906 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 SUSD6Q92537 303 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 DHTKD1Q96HY7 919 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-212ENST00000451542 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
SMPD4-212ENST00000451542 COL25A1Q9BXS0 654 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-212ENST00000451542 SCN1AP35498 2009 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 PPEF2O14830 753 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 IKBKBO14920 756 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 STX10O60499 249 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 LRG1P02750 347 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 CYP11A1P05108 521 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 C8AP07357 584 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 EPB41P11171 864 aaKnown RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 ATF2P15336 505 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 IGFBP6P24592 240 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 ATICP31939 592 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 PRCPP42785 496 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 FKBP3Q00688 224 aaKnown RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 MYL7Q01449 175 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 TSPY1Q01534 308 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 ENPEPQ07075 957 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 SMARCB1Q12824 385 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 C12orf76Q8N812 135 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 CCDC150Q8NCX0 1101 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 SMG7Q92540 1137 aaKnown RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 SYAP1Q96A49 352 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 ACSF2Q96CM8 615 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 GDAP2Q9NXN4 497 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 AFF4Q9UHB7 1163 aaKnown RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-212ENST00000451542 SNX9Q9Y5X1 595 aa12.96□□□□□ -0.33
SMPD4-212ENST00000451542 PLXNA3P51805 1871 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 TNFRSF10AO00220 468 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 SPTLC1O15269 473 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 ABLIM3O94929 683 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 LHX1P48742 406 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 VAMP7P51809 220 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 WNT7BP56706 349 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 TNNC1P63316 161 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 ZP2Q05996 745 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 GPR17Q13304 367 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 PLD1Q13393 1074 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-212ENST00000451542 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 OTOP3Q7RTS5 596 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 SMYD4Q8IYR2 804 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-212ENST00000451542 DCP1BQ8IZD4 617 aaKnown RBP12.95□□□□□ -0.34
SMPD4-212ENST00000451542 ADSSL1Q8N142 457 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 TOP6BLQ8N6T0 577 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 SLC7A14Q8TBB6 771 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 PARD3BQ8TEW8 1205 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 IMPG2Q9BZV3 1241 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 CYP4F11Q9HBI6 524 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 MAN1B1Q9UKM7 699 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 USTQ9Y2C2 406 aa12.95□□□□□ -0.34
SMPD4-212ENST00000451542 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 ADAM12O43184 909 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 FGFR1OPO95684 399 aaKnown RBP12.94□□□□□ -0.34
SMPD4-212ENST00000451542 POU2F2P09086 479 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 P4HA1P13674 534 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
SMPD4-212ENST00000451542 CCNE1P24864 410 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 PCSK1P29120 753 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 CASP4P49662 377 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 ADCY1Q08828 1119 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 ZCWPW2Q504Y3 356 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 ISM2Q6H9L7 571 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 IQCEQ6IPM2 695 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 TCEAL8Q8IYN2 117 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 C2orf15Q8WU43 125 aaKnown RBP12.94□□□□□ -0.34
SMPD4-212ENST00000451542 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-212ENST00000451542 RPGRIP1Q96KN7 1286 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 MMS19Q96T76 1030 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 NUP62CLQ9H1M0 184 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
SMPD4-212ENST00000451542 COL6A3P12111 3177 aa12.93□□□□□ -0.34
SMPD4-212ENST00000451542 LRRIQ3A6PVS8 624 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-212ENST00000451542 SLC16A3O15427 465 aaKnown RBP12.93□□□□□ -0.34
SMPD4-212ENST00000451542 RFPL2O75678 378 aa12.93□□□□□ -0.34
SMPD4-212ENST00000451542 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
SMPD4-212ENST00000451542 ALDH1A3P47895 512 aa12.93□□□□□ -0.34
SMPD4-212ENST00000451542 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
SMPD4-212ENST00000451542 CLDN10P78369 228 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms