RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 AARSP49588 968 aaKnown RBP eCLIP10.46□□□□□ -0.73
USP54-207ENST00000451492 CYP2J2P51589 502 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 KRT85P78386 507 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 BFSP1Q12934 665 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 HTR4Q13639 388 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 SV2CQ496J9 727 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 SLC39A12Q504Y0 691 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 SCARA3Q6AZY7 606 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 UNC13DQ70J99 1090 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 PDZD4Q76G19 769 aaPredicted RBP10.46□□□□□ -0.73
USP54-207ENST00000451492 BMP8AQ7Z5Y6 402 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 METTL23Q86XA0 190 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 GPD1LQ8N335 351 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 GPR152Q8TDT2 470 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 C7orf25Q9BPX7 421 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 RPP25Q9BUL9 199 aaKnown RBP10.46□□□□□ -0.73
USP54-207ENST00000451492 MTMR12Q9C0I1 747 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 MAGEF1Q9HAY2 307 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 GDPD2Q9HCC8 539 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 PDE11AQ9HCR9 933 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 IGSF9Q9P2J2 1179 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 AFF4Q9UHB7 1163 aaKnown RBP10.46□□□□□ -0.73
USP54-207ENST00000451492 CDH7Q9ULB5 785 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 KCNH3Q9ULD8 1083 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 AGAP1Q9UPQ3 857 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 SLC27A5Q9Y2P5 690 aa10.46□□□□□ -0.73
USP54-207ENST00000451492 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.74
USP54-207ENST00000451492 PTPRJQ12913 1337 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 ANO9A1A5B4 782 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 ARHGEF37A1IGU5 675 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 MTMR11A4FU01 709 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 NRG2O14511 850 aaPredicted RBP10.45□□□□□ -0.74
USP54-207ENST00000451492 EXTL3O43909 919 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 PAPLNO95428 1278 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 VNN2O95498 520 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 AVPR2P30518 371 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 DUSP4Q13115 394 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 TPGS2Q68CL5 300 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 CWF19L1Q69YN2 538 aaKnown RBP10.45□□□□□ -0.74
USP54-207ENST00000451492 ATL3Q6DD88 541 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 IQCEQ6IPM2 695 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 CBWD2Q8IUF1 395 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 TCEAL8Q8IYN2 117 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 SLC44A3Q8N4M1 653 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 TMEM105Q8N8V8 129 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 C1orf127Q8N9H9 656 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 OR10T2Q8NGX3 314 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 LEO1Q8WVC0 666 aaPredicted RBP10.45□□□□□ -0.74
USP54-207ENST00000451492 ZNF512Q96ME7 567 aaPredicted RBP10.45□□□□□ -0.74
USP54-207ENST00000451492 TSPAN18Q96SJ8 248 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 SEPT5Q99719 369 aaPredicted RBP10.45□□□□□ -0.74
USP54-207ENST00000451492 SLITRK6Q9H5Y7 841 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 FAM86C1Q9NVL1 165 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 HSPBP1Q9NZL4 362 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 CEP72Q9P209 647 aa10.45□□□□□ -0.74
USP54-207ENST00000451492 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
USP54-207ENST00000451492 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 COL4A2P08572 1712 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 OR6C75A6NL08 312 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 KPNA7A9QM74 516 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 EIF3DO15371 548 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP54-207ENST00000451492 ACTN4O43707 911 aaKnown RBP10.44□□□□□ -0.74
USP54-207ENST00000451492 OAZ2O95190 189 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 SRFP11831 508 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 TYMPP19971 482 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 ACAT1P24752 427 aaKnown RBP10.44□□□□□ -0.74
USP54-207ENST00000451492 HOXD13P35453 343 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 CCR2P41597 374 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 NHLH1Q02575 133 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 MGAT5BQ3V5L5 792 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 WSCD1Q658N2 575 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 MTSS1LQ765P7 747 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 CSGALNACT2Q8N6G5 542 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 ATAD1Q8NBU5 361 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 STKLD1Q8NE28 680 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 FAM200AQ8TCP9 573 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 CACTINQ8WUQ7 758 aaKnown RBP10.44□□□□□ -0.74
USP54-207ENST00000451492 ANKRD36BP1Q96IX9 119 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 LPIN3Q9BQK8 851 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 ASAH2Q9NR71 780 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 AGPAT3Q9NRZ7 376 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 EXOC1Q9NV70 894 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 ABI2Q9NYB9 513 aaPredicted RBP10.44□□□□□ -0.74
USP54-207ENST00000451492 RCOR1Q9UKL0 485 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
USP54-207ENST00000451492 PTPRDP23468 1912 aa10.44□□□□□ -0.74
USP54-207ENST00000451492 UBE4BO95155 1302 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 ZNF233A6NK53 670 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 ANHXE9PGG2 379 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 H0Y858 1186 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 HCRTO43612 131 aa10.43□□□□□ -0.74
USP54-207ENST00000451492 TNNC2P02585 160 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms