RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZNF852Q6ZMS4 543 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 ZNF720Q7Z2F6 126 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 SFR1Q86XK3 245 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 ATAD1Q8NBU5 361 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 LEMD2Q8NC56 503 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 SHKBP1Q8TBC3 707 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 ST6GALNAC4Q9H4F1 302 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 CCDC39Q9UFE4 941 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 AGO2Q9UKV8 859 aaKnown RBP29.4■■■□□ 2.3
USP42-204ENST00000451154 SRPRBQ9Y5M8 271 aaKnown RBP29.4■■■□□ 2.3
USP42-204ENST00000451154 FANCMQ8IYD8 2048 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 TARSP26639 723 aaKnown RBP29.39■■■□□ 2.3
USP42-204ENST00000451154 EPHB3P54753 998 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 MYBPC2Q14324 1141 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 SLFN12LQ6IEE8 588 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 VITQ6UXI7 678 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 ZSCAN18Q8TBC5 510 aaPredicted RBP29.39■■■□□ 2.3
USP42-204ENST00000451154 NELL2Q99435 816 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 LRRC3Q9BY71 257 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 DNAJC25Q9H1X3 360 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 DERAQ9Y315 318 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 STYXL1Q9Y6J8 313 aa29.39■■■□□ 2.3
USP42-204ENST00000451154 ANO9A1A5B4 782 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 SHISA7A6NL88 538 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 LAMTOR5O43504 91 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 ODC1P11926 461 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 SYT1P21579 422 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 ALDH1A3P47895 512 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 CDR1P51861 262 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 RESTQ13127 1097 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 RRAGBQ5VZM2 374 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 ARMCX5Q6P1M9 558 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 CLDN23Q96B33 292 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 ASB7Q9H672 318 aa29.38■■■□□ 2.29
USP42-204ENST00000451154 MTMR11A4FU01 709 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 MYMKA6NI61 221 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 SOAT2O75908 522 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 GDI1P31150 447 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 PLD1Q13393 1074 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 ZC3H14Q6PJT7 736 aaKnown RBP29.37■■■□□ 2.29
USP42-204ENST00000451154 GPIHBP1Q8IV16 184 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 TTC9BQ8N6N2 239 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 DNASE1L2Q92874 299 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 SLITRK6Q9H5Y7 841 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 DPP3Q9NY33 737 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 TBC1D7Q9P0N9 293 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 STK17AQ9UEE5 414 aa29.37■■■□□ 2.29
USP42-204ENST00000451154 A0A1W2PRU2 124 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 PSMC3P17980 439 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 ADSSP30520 456 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 CSTF1Q05048 431 aaKnown RBP29.36■■■□□ 2.29
USP42-204ENST00000451154 FZD5Q13467 585 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 CRELD2Q6UXH1 353 aaPredicted RBP29.36■■■□□ 2.29
USP42-204ENST00000451154 TMC8Q8IU68 726 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 OR10T2Q8NGX3 314 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 POMGNT1Q8WZA1 660 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 IRF7Q92985 503 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 PANK2Q9BZ23 570 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 MRPL44Q9H9J2 332 aaKnown RBP29.36■■■□□ 2.29
USP42-204ENST00000451154 TRPV4Q9HBA0 871 aa29.36■■■□□ 2.29
USP42-204ENST00000451154 ZNF334Q9HCZ1 680 aaPredicted RBP29.36■■■□□ 2.29
USP42-204ENST00000451154 MRPS17Q9Y2R5 130 aaKnown RBP29.36■■■□□ 2.29
USP42-204ENST00000451154 TULP1O00294 542 aaPredicted RBP29.35■■■□□ 2.29
USP42-204ENST00000451154 NCAM2O15394 837 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 PAX3P23760 479 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 KCNA1Q09470 495 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 SV2BQ7L1I2 683 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 DNAJB7Q7Z6W7 309 aaPredicted RBP29.35■■■□□ 2.29
USP42-204ENST00000451154 DNAJC19Q96DA6 116 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 STRA6Q9BX79 667 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 GPR88Q9GZN0 384 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 C2CD2Q9Y426 696 aa29.35■■■□□ 2.29
USP42-204ENST00000451154 DMXL1Q9Y485 3027 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 DCHS1Q96JQ0 3298 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 HEPACAM2A8MVW5 462 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 CYB561D2O14569 222 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 PPP1R37O75864 691 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 CYP11A1P05108 521 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 MAGEA9P43362 315 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 MFSD6LQ8IWD5 586 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 FBXO4Q9UKT5 387 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 NDRG2Q9UN36 371 aaKnown RBP29.34■■■□□ 2.29
USP42-204ENST00000451154 NCANO14594 1321 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 OTOGLQ3ZCN5 2332 aa29.34■■■□□ 2.29
USP42-204ENST00000451154 POSTNQ15063 836 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 ZNF528Q3MIS6 628 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 SLC39A12Q504Y0 691 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 STXBP5Q5T5C0 1151 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 EFCAB13Q8IY85 973 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 DEPDC1BQ8WUY9 529 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 HVCN1Q96D96 273 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 RSPRY1Q96DX4 576 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 PYM1Q9BRP8 204 aaKnown RBP29.33■■■□□ 2.29
USP42-204ENST00000451154 FOXD4L1Q9NU39 408 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 ASB3Q9Y575 518 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 PATJQ8NI35 1801 aa29.33■■■□□ 2.29
USP42-204ENST00000451154 GPR179Q6PRD1 2367 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 TICRRQ7Z2Z1 1910 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 MAN2B1O00754 1011 aa29.32■■■□□ 2.28
USP42-204ENST00000451154 ZNF263O14978 683 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms