RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SCARA3Q6AZY7 606 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 ISM2Q6H9L7 571 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 LLGL2Q6P1M3 1020 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 DSTYKQ6XUX3 929 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 C15orf39Q6ZRI6 1047 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 RTL10Q7L3V2 364 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 FAM186BQ8IYM0 893 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 CSGALNACT2Q8N6G5 542 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 CMASQ8NFW8 434 aaPredicted RBP15.47■□□□□ 0.07
COL3A1-203ENST00000450867 SUSD6Q92537 303 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
COL3A1-203ENST00000450867 VRTNQ9H8Y1 702 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 FBXL5Q9UKA1 691 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 DSEQ9UL01 958 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 CDY1Q9Y6F8 540 aa15.47■□□□□ 0.07
COL3A1-203ENST00000450867 BICDL2A1A5D9 508 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 TRIM49BA6NDI0 452 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 MBTPS2O43462 519 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 C4BPAP04003 597 aaKnown RBP15.46■□□□□ 0.07
COL3A1-203ENST00000450867 OR1D2P34982 312 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 KCNQ1P51787 676 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 VAMP7P51809 220 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 DLG4P78352 724 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 ROR1Q01973 937 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 YWHAHQ04917 246 aaPredicted RBP15.46■□□□□ 0.07
COL3A1-203ENST00000450867 ITIH3Q06033 890 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 SMAD2Q15796 467 aaKnown RBP15.46■□□□□ 0.07
COL3A1-203ENST00000450867 ZACNQ401N2 412 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 TJAP1Q5JTD0 557 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
COL3A1-203ENST00000450867 ELMSAN1Q6PJG2 1045 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 CYP26C1Q6V0L0 522 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 DPH6Q7L8W6 267 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 CEP63Q96MT8 703 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 DUSP9Q99956 384 aaKnown RBP15.46■□□□□ 0.07
COL3A1-203ENST00000450867 XYLT2Q9H1B5 865 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 SFXN1Q9H9B4 322 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 MAN1C1Q9NR34 630 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 MAFFQ9ULX9 164 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 DOCK8Q8NF50 2099 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 NOTCH4Q99466 2003 aa15.46■□□□□ 0.07
COL3A1-203ENST00000450867 OR6C75A6NL08 312 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 CYB561D2O14569 222 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 CST3P01034 146 aaPredicted RBP15.45■□□□□ 0.06
COL3A1-203ENST00000450867 POU2F2P09086 479 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 HOXA9P31269 272 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 ATICP31939 592 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 MYO1EQ12965 1108 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 PAK1Q13153 545 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 CTXN3Q4LDR2 81 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 TPGS2Q68CL5 300 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 OVOS1Q6IE37 1185 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 PTCRAQ6ISU1 281 aaPredicted RBP15.45■□□□□ 0.06
COL3A1-203ENST00000450867 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 PALB2Q86YC2 1186 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 TMEM86AQ8N2M4 240 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 TOP6BLQ8N6T0 577 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 MLKLQ8NB16 471 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 KREMEN2Q8NCW0 462 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 ZNF461Q8TAF7 563 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 NELFBQ8WX92 580 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 HPDLQ96IR7 371 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 ADAM7Q9H2U9 754 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 FAM50BQ9Y247 325 aa15.45■□□□□ 0.06
COL3A1-203ENST00000450867 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 VNN1O95497 513 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 KRT19P08727 400 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 FAM163BP0C2L3 166 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
COL3A1-203ENST00000450867 KRT13P13646 458 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 GTF2H1P32780 548 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 SV2AQ7L0J3 742 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 FILIP1Q7Z7B0 1213 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 GLYCTKQ8IVS8 523 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 RTP3Q9BQQ7 232 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 ZDHHC7Q9NXF8 308 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 RWDD2AQ9UIY3 292 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 L1RE1Q9UN81 338 aa15.44■□□□□ 0.06
COL3A1-203ENST00000450867 USP15Q9Y4E8 981 aaPredicted RBP15.44■□□□□ 0.06
COL3A1-203ENST00000450867 TIMM13Q9Y5L4 95 aaPredicted RBP15.44■□□□□ 0.06
COL3A1-203ENST00000450867 GABRDO14764 452 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 HUS1O60921 280 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 ZMYND10O75800 440 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 HNRNPA1P09651 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 ATF2P15336 505 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 MARSP56192 900 aaKnown RBP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 PPP3CAQ08209 521 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 GPR17Q13304 367 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 CLUL1Q15846 466 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 SOWAHAQ2M3V2 549 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 CT47A1Q5JQC4 288 aaPredicted RBP15.43■□□□□ 0.06
COL3A1-203ENST00000450867 WSCD1Q658N2 575 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 KLHL10Q6JEL2 608 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 GPR149Q86SP6 731 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 TCEAL8Q8IYN2 117 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 PDCL2Q8N4E4 241 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 TAF4BQ92750 862 aa15.43■□□□□ 0.06
COL3A1-203ENST00000450867 SYAP1Q96A49 352 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms