RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TTC29Q8NA56 475 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 KBTBD3Q8NAB2 608 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TDRD5Q8NAT2 981 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SLC30A5Q8TAD4 765 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CKAP2Q8WWK9 683 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 RFFLQ8WZ73 363 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ARL8AQ96BM9 186 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 EDC3Q96F86 508 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SNX27Q96L92 541 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 C9orf16Q9BUW7 83 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 KLC2Q9H0B6 622 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CLK4Q9HAZ1 481 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 EML4Q9HC35 981 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 PREBQ9HCU5 417 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZNF304Q9HCX3 659 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MRPL47Q9HD33 250 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 GPR108Q9NPR9 543 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 AVENQ9NQS1 362 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 KRT84Q9NSB2 600 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TRNAU1APQ9NX07 287 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 KCNK4Q9NYG8 393 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TAS2R1Q9NYW7 299 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 UBA2Q9UBT2 640 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 ASAP1Q9ULH1 1129 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ING4Q9UNL4 249 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 MAPRE3Q9UPY8 281 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 BAIAP2Q9UQB8 552 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 B3GNT3Q9Y2A9 372 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ASB3Q9Y575 518 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CDY2AQ9Y6F7 541 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CDY1Q9Y6F8 540 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 GRIN2DO15399 1336 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SH3PXD2BA1X283 911 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ISPDA4D126 451 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 POC1B-GALNT4F8VUJ3 575 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EML1O00423 815 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GSTA4O15217 222 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GNPATO15228 680 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PJA2O43164 708 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ATMINO43313 823 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 RAD51CO43502 376 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SIN3BO75182 1162 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KLHL18O94889 574 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 APOL3O95236 402 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GJB6O95452 261 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CRYZL1O95825 349 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 FTCDO95954 541 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TNNC2P02585 160 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MMP1P03956 469 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ENO1P06733 434 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ZNF18P17022 549 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ITIH1P19827 911 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NFKBIAP25963 317 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PDIA3P30101 505 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ATP6V1E1P36543 226 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 YAP1P46937 504 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 RXRGP48443 463 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 USP11P51784 963 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MFAP3P55082 362 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 POLR2FP61218 127 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ATP6V0D1P61421 351 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CDK16Q00536 496 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BFSP1Q12934 665 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MAPK6Q16659 721 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ANKDD1AQ495B1 522 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ACCSLQ4AC99 568 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EPC2Q52LR7 807 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TAF1BQ53T94 588 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 WDR44Q5JSH3 913 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 FAM122CQ6P4D5 195 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 BNC2Q6ZN30 1099 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 STOX1Q6ZVD7 989 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ANKLE2Q86XL3 938 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SETD9Q8NE22 299 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KBTBD8Q8NFY9 601 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BCL7BQ9BQE9 202 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GPATCH1Q9BRR8 931 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ERP44Q9BS26 406 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EMILIN2Q9BXX0 1053 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RNF26Q9BY78 433 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 SHCBP1LQ9BZQ2 653 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CEP44Q9C0F1 390 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MYLK2Q9H1R3 596 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SSU72Q9NP77 194 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 CABP5Q9NP86 173 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CABP2Q9NPB3 220 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SAMSN1Q9NSI8 373 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 RBM12Q9NTZ6 932 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 NSMCE4AQ9NXX6 385 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 DDX56Q9NY93 547 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ADAM22Q9P0K1 906 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TBC1D14Q9P2M4 693 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TBK1Q9UHD2 729 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PFDN2Q9UHV9 154 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GPN3Q9UHW5 284 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PRPF19Q9UMS4 504 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 SOX13Q9UN79 622 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 DNM3Q9UQ16 869 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 STXBP5LQ9Y2K9 1186 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms