RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TFAMQ00059 246 aaKnown RBP16.51■□□□□ 0.23
CHD3-205ENST00000449744 GPR17Q13304 367 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 PLD1Q13393 1074 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 MYBPC2Q14324 1141 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 SLC5A9Q2M3M2 681 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 BRSK2Q8IWQ3 736 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 THEM5Q8N1Q8 247 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 CACTINQ8WUQ7 758 aaKnown RBP16.51■□□□□ 0.23
CHD3-205ENST00000449744 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
CHD3-205ENST00000449744 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 SLC2A4RGQ9NR83 387 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 GDE1Q9NZC3 331 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 YIPF1Q9Y548 306 aa16.51■□□□□ 0.23
CHD3-205ENST00000449744 KRBA1A5PL33 1030 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 CYB561D2O14569 222 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
CHD3-205ENST00000449744 POLR2DO15514 142 aaKnown RBP16.5■□□□□ 0.23
CHD3-205ENST00000449744 EXTL3O43909 919 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 CYP11A1P05108 521 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 CEBPBP17676 345 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 GPC5P78333 572 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 DUSP4Q13115 394 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 PKP1Q13835 747 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 SV2CQ496J9 727 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 GPD1LQ8N335 351 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 LEMD2Q8NC56 503 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
CHD3-205ENST00000449744 HPS3Q969F9 1004 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 ZNF560Q96MR9 790 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 KXD1Q9BQD3 176 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 CBWD1Q9BRT8 395 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 ASAH2Q9NR71 780 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 ARHGEF3Q9NR81 526 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 CEP72Q9P209 647 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 PCDHA7Q9UN72 937 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 ANK1P16157 1881 aa16.5■□□□□ 0.23
CHD3-205ENST00000449744 KPNA7A9QM74 516 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 H0Y858 1186 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 MICAL2O94851 1124 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 MYL4P12829 197 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 PNPLA4P41247 253 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 ALDH1A3P47895 512 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 EPHB3P54753 998 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 DNM1Q05193 864 aaKnown RBP16.49■□□□□ 0.23
CHD3-205ENST00000449744 PRSS36Q5K4E3 855 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 FAM26FQ5R3K3 315 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 TCEAL4Q96EI5 215 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 SHDQ96IW2 340 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 C7orf25Q9BPX7 421 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 TBC1D17Q9HA65 648 aa16.49■□□□□ 0.23
CHD3-205ENST00000449744 R3HCC1Q9Y3T6 440 aaKnown RBP16.49■□□□□ 0.23
CHD3-205ENST00000449744 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 MTMR11A4FU01 709 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 EIF3DO15371 548 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHD3-205ENST00000449744 PI15O43692 258 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 ECI2O75521 394 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 ITGB3P05106 788 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 TMEM191BP0C7N4 346 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
CHD3-205ENST00000449744 PFKPQ01813 784 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 CENPPQ6IPU0 288 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 UNC13DQ70J99 1090 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 CEP57L1Q8IYX8 460 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 ATAD1Q8NBU5 361 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 GLIS3Q8NEA6 775 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 ZSWIM2Q8NEG5 633 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 TMEM209Q96SK2 561 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 PHOX2BQ99453 314 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 RCOR1Q9UKL0 485 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 AGAP1Q9UPQ3 857 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 SLC27A5Q9Y2P5 690 aa16.48■□□□□ 0.23
CHD3-205ENST00000449744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
CHD3-205ENST00000449744 ZNF233A6NK53 670 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 KRT19P08727 400 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 CCR2P41597 374 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 AFMP43652 599 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 WNT7BP56706 349 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 SURF1Q15526 300 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 SLC39A12Q504Y0 691 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 WSCD1Q658N2 575 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 PHLDB3Q6NSJ2 640 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 OR10T2Q8NGX3 314 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 ZCWPW1Q9H0M4 648 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 BLZF1Q9H2G9 400 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 CRISPLD1Q9H336 500 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 ZFP14Q9HCL3 533 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 FAM86C1Q9NVL1 165 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 ITGA11Q9UKX5 1188 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 TRIOO75962 3097 aa16.47■□□□□ 0.23
CHD3-205ENST00000449744 VNN2O95498 520 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 TUFMP49411 452 aaKnown RBP16.46■□□□□ 0.23
CHD3-205ENST00000449744 EPHA5P54756 1037 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 SMARCB1Q12824 385 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms