RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 NUCB1Q02818 461 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 PPP2R5CQ13362 524 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 ANO7Q6IWH7 933 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 RNF19BQ6ZMZ0 732 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 GAREM2Q75VX8 874 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 TMEFF1Q8IYR6 380 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 DAGLBQ8NCG7 672 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 CHFRQ96EP1 664 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 PRIMPOLQ96LW4 560 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 EBF3Q9H4W6 596 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 HPS4Q9NQG7 708 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 PRMT7Q9NVM4 692 aaPredicted RBP13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 YIPF1Q9Y548 306 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 KALRNO60229 2985 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 PRAMEF12O95522 483 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 IGHDP01880 384 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CPB1P15086 417 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 PTGER3P43115 390 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 ALDH1A3P47895 512 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CYP4A11Q02928 519 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CYP4F3Q08477 520 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 DUOXA1Q1HG43 343 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 ZNF280DQ6N043 979 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 ARMCX6Q7L4S7 300 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 DNAJB7Q7Z6W7 309 aaPredicted RBP13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 RASSF3Q86WH2 238 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CCDC26Q8TAB7 109 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CEP76Q8TAP6 659 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 HNRNPABQ99729 332 aaKnown RBP13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 LXNQ9BS40 222 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 PDZD7Q9H5P4 517 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 TASP1Q9H6P5 420 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 ZSWIM4Q9H7M6 989 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 FSCN3Q9NQT6 498 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 RGL1Q9NZL6 768 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
AC004540.1-204ENST00000449537 HECTD1Q9ULT8 2610 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 CAPN9O14815 690 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 SH3BP5O60239 455 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 GABRR2P28476 465 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 ABCG1P45844 678 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 EPHA7Q15375 998 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 LYSMD4Q5XG99 296 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 MINDY1Q8N5J2 469 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 CCDC148Q8NFR7 591 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 FZD8Q9H461 694 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 POLMQ9NP87 494 aaPredicted RBP13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 ASB3Q9Y575 518 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 NUB1Q9Y5A7 615 aa13.81□□□□□ -0.2
AC004540.1-204ENST00000449537 ADAMTS9Q9P2N4 1935 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 SPTA1P02549 2419 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 CAPN8A6NHC0 703 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 LRRIQ4A6NIV6 560 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 SLC27A2O14975 620 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 DGAT1O75907 488 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 SERPINF2P08697 491 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 HOXD12P35452 270 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 AKAP17AQ02040 695 aaKnown RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 DUSP4Q13115 394 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 PRPF4BQ13523 1007 aaKnown RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 SPDYCQ5MJ68 293 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 LMBRD2Q68DH5 695 aaPredicted RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 PPP4R3AQ6IN85 833 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 TTC30AQ86WT1 665 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 APPL2Q8NEU8 664 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 FAM20AQ96MK3 541 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 FNBP1Q96RU3 617 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 POLR3CQ9BUI4 534 aaPredicted RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 SMG9Q9H0W8 520 aaKnown RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 CLMPQ9H6B4 373 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 DDX25Q9UHL0 483 aaKnown RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 VAV3Q9UKW4 847 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 TBX20Q9UMR3 447 aa13.8□□□□□ -0.2
AC004540.1-204ENST00000449537 NUP210Q8TEM1 1887 aaPredicted RBP13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
AC004540.1-204ENST00000449537 PODXLO00592 558 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms