RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 P4HA1P13674 534 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 LRPAP1P30533 357 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CYLC1P35663 651 aaPredicted RBP13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RASIP1Q5U651 963 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TOGARAM2Q6ZUX3 1019 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 FAM71AQ8IYT1 594 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ELAC1Q9H777 363 aaKnown RBP13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NHEJ1Q9H9Q4 299 aaPredicted RBP13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 POLIQ9UNA4 740 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 INPP5FQ9Y2H2 1132 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TRANK1O15050 2925 aa13.62□□□□□ -0.23
HLA-DRB9-201ENST00000449413 FOXN3O00409 490 aaPredicted RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NDUFA10O95299 355 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 KRT5P13647 590 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ACO1P21399 889 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 IGFBP4P22692 258 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 EIF4A3P38919 411 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PBX2P40425 430 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 USP8P40818 1118 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PNPLA4P41247 253 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PDE6CP51160 858 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 AFF1P51825 1210 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 KIF11P52732 1056 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 YWHAEP62258 255 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TNNC1P63316 161 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 FAM189BP81408 668 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SV2CQ496J9 727 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CLLU1OSQ5K130 101 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 IRF2BP2Q7Z5L9 587 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CCDC170Q8IYT3 715 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 KIAA1524Q8TCG1 905 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 URGCPQ8TCY9 931 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 DESI2Q9BSY9 194 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 HAUS4Q9H6D7 363 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SMYD3Q9H7B4 428 aa13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NXF1Q9UBU9 619 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 BZW2Q9Y6E2 419 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB9-201ENST00000449413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ESPNB1AK53 854 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PIRO00625 290 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ENPP3O14638 875 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 OFD1O75665 1012 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 FGFR1P11362 822 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ANXA13P27216 316 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RAP1GAPP47736 663 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TAF6P49848 677 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PTK2Q05397 1052 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RAB30Q15771 203 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TMEM31Q5JXX7 168 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MFSD5Q6N075 450 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 RBBP8NLQ8NC74 664 aaPredicted RBP13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ACRBPQ8NEB7 543 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 EPS8L1Q8TE68 723 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CCDC42Q96M95 316 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 MIOSQ9NXC5 875 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PCDHB4Q9Y5E5 795 aa13.6□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CASTOR2A6NHX0 329 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 EIF3CLB5ME19 914 aaKnown RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PODXLO00592 558 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CYP26A1O43174 497 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 HOXA2O43364 376 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 AKR1B10O60218 316 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 IPO7O95373 1038 aaKnown RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 POMCP01189 267 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 PFKMP08237 780 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CCDC175P0C221 793 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 CD58P19256 250 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ZNF132P52740 706 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TUSC3Q13454 348 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ASTE1Q2TB18 679 aaPredicted RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NOMO2Q5JPE7 1267 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TMEM270Q6UE05 265 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 VPS36Q86VN1 386 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 NPAS4Q8IUM7 802 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 C17orf53Q8N3J3 647 aaPredicted RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 TMEM199Q8N511 208 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 OLIG1Q8TAK6 271 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 UROC1Q96N76 676 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 EIF3CQ99613 913 aaKnown RBP13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SYT11Q9BT88 431 aa13.59□□□□□ -0.23
HLA-DRB9-201ENST00000449413 SDCBP2Q9H190 292 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms