RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 IL18RAPO95256 599 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 DCNP07585 359 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 PSMC3P17980 439 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 PLCG1P19174 1290 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 SDHBP21912 280 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 PNPLA4P41247 253 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 AARSP49588 968 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS41-208ENST00000448833 EPHA5P54756 1037 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 LILRA4P59901 499 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 TWF1Q12792 350 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 ALCAMQ13740 583 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 DHX8Q14562 1220 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 MCM6Q14566 821 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 TMEM132DQ14C87 1099 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 UBXN2BQ14CS0 331 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 VEPH1Q14D04 833 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 PTPAQ15257 358 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 ENOX2Q16206 610 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 SEZ6Q53EL9 994 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 PRSS36Q5K4E3 855 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 ADALQ6DHV7 355 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 CCDC73Q6ZRK6 1079 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 STXBP4Q6ZWJ1 553 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 SV2BQ7L1I2 683 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 ERMP1Q7Z2K6 904 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 YAF2Q8IY57 180 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 ADSSL1Q8N142 457 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 CACTINQ8WUQ7 758 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 ATRIPQ8WXE1 791 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 CLDN23Q96B33 292 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 ASB16Q96NS5 453 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 KXD1Q9BQD3 176 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 RPP25Q9BUL9 199 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 ZSCAN16Q9H4T2 348 aaPredicted RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 TRPV4Q9HBA0 871 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 SPATA6Q9NWH7 488 aaPredicted RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 DLGAP2Q9P1A6 1054 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 TUBGCP4Q9UGJ1 667 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 CPSF3Q9UKF6 684 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 AGO2Q9UKV8 859 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 R3HCC1Q9Y3T6 440 aaKnown RBP7.67□□□□□ -1.18
VPS41-208ENST00000448833 C2CD2Q9Y426 696 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 PCDHGA2Q9Y5H1 932 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 DENND4CQ5VZ89 1909 aa7.67□□□□□ -1.18
VPS41-208ENST00000448833 TICRRQ7Z2Z1 1910 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SCN1AP35498 2009 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 NPHP3-ACAD11A0A0J9YXS1 232 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 VPS37CA5D8V6 355 aaPredicted RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 SOBPA7XYQ1 873 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 PIRO00625 290 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 ZNF263O14978 683 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 KIAA0391O15091 583 aaKnown RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 SPTLC1O15269 473 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SEC24AO95486 1093 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 CYP11A1P05108 521 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SP9P0CG40 484 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 MYL4P12829 197 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 CUL4AQ13619 759 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 KARSQ15046 597 aaKnown RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 TAF12Q16514 161 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SLC5A9Q2M3M2 681 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SV2CQ496J9 727 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 ARHGAP15Q53QZ3 475 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 FAM78AQ5JUQ0 283 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 RRAGBQ5VZM2 374 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 TANGO2Q6ICL3 276 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 RNF19BQ6ZMZ0 732 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 ZNF720Q7Z2F6 126 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 MFSD6LQ8IWD5 586 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 CSGALNACT1Q8TDX6 532 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 ING5Q8WYH8 240 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 POMGNT1Q8WZA1 660 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 RUBCNQ92622 972 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 INTS4Q96HW7 963 aaKnown RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 GCNAQ96QF7 691 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SLITRK6Q9H5Y7 841 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 MRPL44Q9H9J2 332 aaKnown RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 LTB4R2Q9NPC1 389 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 BLOC1S4Q9NUP1 217 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 SRPRBQ9Y5M8 271 aaKnown RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 STYXL1Q9Y6J8 313 aa7.66□□□□□ -1.18
VPS41-208ENST00000448833 MORC2Q9Y6X9 1032 aaPredicted RBP7.66□□□□□ -1.18
VPS41-208ENST00000448833 ANO9A1A5B4 782 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 DPYSL4O14531 572 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 CHADO15335 359 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 ZNF292O60281 2723 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 FAM189A1O60320 539 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 CEBPBP17676 345 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 IGFBP6P24592 240 aaPredicted RBP7.65□□□□□ -1.18
VPS41-208ENST00000448833 WEE1P30291 646 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 TNFSF9P41273 254 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 TAF6P49848 677 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 AMPD3Q01432 767 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 AMPD2Q01433 879 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 SPAG1Q07617 926 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 DUSP4Q13115 394 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 C9orf57Q5W0N0 161 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 RALGAPA1Q6GYQ0 2036 aa7.65□□□□□ -1.18
VPS41-208ENST00000448833 JADE1Q6IE81 842 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms