RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 IQCEQ6IPM2 695 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ZNF852Q6ZMS4 543 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 SFR1Q86XK3 245 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ING5Q8WYH8 240 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ZBTB45Q96K62 511 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 OXCT2Q9BYC2 517 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 FGFBP2Q9BYJ0 223 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 ZFP14Q9HCL3 533 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 LTB4R2Q9NPC1 389 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 SPATA6Q9NWH7 488 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 TBC1D7Q9P0N9 293 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 AFF4Q9UHB7 1163 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 FBXL5Q9UKA1 691 aa14.92□□□□□ -0.02
PDLIM2-213ENST00000448520 BIN1O00499 593 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 FAM13AO94988 1023 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 RPN1P04843 607 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 SCP2P22307 547 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 AMPD3Q01432 767 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 KYAT1Q16773 422 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 SLC5A9Q2M3M2 681 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 KMT5BQ4FZB7 885 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 TANGO2Q6ICL3 276 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 ZNF280DQ6N043 979 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 PDZD4Q76G19 769 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 MAML2Q8IZL2 1156 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 LEMD2Q8NC56 503 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 TMEM161BQ8NDZ6 487 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 GLIS3Q8NEA6 775 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 RUBCNQ92622 972 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 DNASE1L2Q92874 299 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 CLDN23Q96B33 292 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 TSPAN18Q96SJ8 248 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 CORO1BQ9BR76 489 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 PANK4Q9NVE7 773 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 LARSQ9P2J5 1176 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 MAN1B1Q9UKM7 699 aa14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 MTF2Q9Y483 593 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-213ENST00000448520 MAN2B1O00754 1011 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 LRRN2O75325 713 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 TBCAO75347 108 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 SEC24AO95486 1093 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 CLTAP09496 248 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 MAPTP10636 758 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 HARSP12081 509 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 RPS9P46781 194 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 MCL1Q07820 350 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 ADCY1Q08828 1119 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 SKOR2Q2VWA4 1001 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 PRSS36Q5K4E3 855 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 CNNM4Q6P4Q7 775 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 KCNN1Q92952 543 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 SMARCE1Q969G3 411 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 C18orf25Q96B23 403 aaPredicted RBP14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 PLA2G2FQ9BZM2 168 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 GPR88Q9GZN0 384 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 INSL5Q9Y5Q6 135 aa14.9□□□□□ -0.02
PDLIM2-213ENST00000448520 ZNF292O60281 2723 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 FRMD3A2A2Y4 597 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 SPTLC1O15269 473 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 XPOTO43592 962 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 OAZ2O95190 189 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 CEBPBP17676 345 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 CYP3A5P20815 502 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 LRPAP1P30533 357 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 TPRG1Q6ZUI0 275 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 UNC13DQ70J99 1090 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 ELOA2Q8IYF1 753 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 MYCT1Q8N699 235 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 ATRIPQ8WXE1 791 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 IRF7Q92985 503 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 HINFPQ9BQA5 517 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 TRMT61BQ9BVS5 477 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 LRRC27Q9C0I9 530 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 GZF1Q9H116 711 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 BRD9Q9H8M2 597 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 TRPV5Q9NQA5 729 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 ANKFY1Q9P2R3 1169 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 HOOK1Q9UJC3 728 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 ODF2LQ9ULJ1 636 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 PCDHGA2Q9Y5H1 932 aa14.89□□□□□ -0.03
PDLIM2-213ENST00000448520 TTC26A0AVF1 554 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 M0QZQ0 153 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 CD72P21854 359 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 PAX3P23760 479 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 NMT1P30419 496 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 CASP5P51878 434 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 ZNF131P52739 623 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 YWHAHQ04917 246 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 CSTF1Q05048 431 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 EHHADHQ08426 723 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 ZBTB6Q15916 424 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 FAM78AQ5JUQ0 283 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 POTEHQ6S545 545 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 MAMSTRQ6ZN01 415 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 RBM43Q6ZSC3 357 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 CCDC65Q8IXS2 484 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms