RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 DDIT3P35638 169 aa30.67■■■□□ 2.5
CBX4-202ENST00000448310 GPR17Q13304 367 aa30.67■■■□□ 2.5
CBX4-202ENST00000448310 TMEM132DQ14C87 1099 aa30.67■■■□□ 2.5
CBX4-202ENST00000448310 CD302Q8IX05 232 aa30.67■■■□□ 2.5
CBX4-202ENST00000448310 TTC9BQ8N6N2 239 aa30.67■■■□□ 2.5
CBX4-202ENST00000448310 TSPAN18Q96SJ8 248 aa30.67■■■□□ 2.5
CBX4-202ENST00000448310 MTMR11A4FU01 709 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 ODC1P11926 461 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 GDI1P31150 447 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 CDR1P51861 262 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 CSTF1Q05048 431 aaKnown RBP30.66■■■□□ 2.5
CBX4-202ENST00000448310 PTPAQ15257 358 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 ADALQ6DHV7 355 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 DYMQ7RTS9 669 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 TMC8Q8IU68 726 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 ATAD1Q8NBU5 361 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 CLDN23Q96B33 292 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 NELL2Q99435 816 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 LRRC3Q9BY71 257 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 SLITRK6Q9H5Y7 841 aa30.66■■■□□ 2.5
CBX4-202ENST00000448310 A0A1W2PRU2 124 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 SOAT2O75908 522 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 PSMC3P17980 439 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 PLD1Q13393 1074 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 FZD5Q13467 585 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 CUL4AQ13619 759 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 CENPPQ6IPU0 288 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 SFR1Q86XK3 245 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 KRI1Q8N9T8 703 aaKnown RBP30.65■■■□□ 2.5
CBX4-202ENST00000448310 FBXO4Q9UKT5 387 aa30.65■■■□□ 2.5
CBX4-202ENST00000448310 NDRG2Q9UN36 371 aaKnown RBP30.65■■■□□ 2.5
CBX4-202ENST00000448310 PIRO00625 290 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 MAGEA9P43362 315 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 EPHB3P54753 998 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 MYBPC2Q14324 1141 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 FAM173BQ6P4H8 233 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 OR10T2Q8NGX3 314 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 IRF7Q92985 503 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 HINFPQ9BQA5 517 aa30.64■■■□□ 2.5
CBX4-202ENST00000448310 ZNF334Q9HCZ1 680 aaPredicted RBP30.64■■■□□ 2.5
CBX4-202ENST00000448310 AGO2Q9UKV8 859 aaKnown RBP30.64■■■□□ 2.5
CBX4-202ENST00000448310 MRPS17Q9Y2R5 130 aaKnown RBP30.64■■■□□ 2.5
CBX4-202ENST00000448310 DCHS1Q96JQ0 3298 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 ANO9A1A5B4 782 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 NCAM2O15394 837 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 ABCD1P33897 745 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 ALDH1A3P47895 512 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 STXBP5Q5T5C0 1151 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 ARMCX5Q6P1M9 558 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 GPIHBP1Q8IV16 184 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 RSPRY1Q96DX4 576 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 CLIC6Q96NY7 704 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 ST6GALNAC4Q9H4F1 302 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 TRPV4Q9HBA0 871 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 FBXO2Q9UK22 296 aaPredicted RBP30.63■■■□□ 2.49
CBX4-202ENST00000448310 DERAQ9Y315 318 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 FRYLO94915 3013 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 GPR179Q6PRD1 2367 aa30.63■■■□□ 2.49
CBX4-202ENST00000448310 HEPACAM2A8MVW5 462 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 ID4P47928 161 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 ZNF528Q3MIS6 628 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 SLFN12LQ6IEE8 588 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 TSSK4Q6SA08 328 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 ZNF720Q7Z2F6 126 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 DEPDC1BQ8WUY9 529 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 ASB7Q9H672 318 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 STYXL1Q9Y6J8 313 aa30.62■■■□□ 2.49
CBX4-202ENST00000448310 KINO60870 393 aaKnown RBP30.61■■■□□ 2.49
CBX4-202ENST00000448310 RPS9P46781 194 aaKnown RBP30.61■■■□□ 2.49
CBX4-202ENST00000448310 CEBPZQ03701 1054 aaKnown RBP30.61■■■□□ 2.49
CBX4-202ENST00000448310 RESTQ13127 1097 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 KIAA2013Q8IYS2 634 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 DCLK2Q8N568 766 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 SUMF1Q8NBK3 374 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 TBC1D7Q9P0N9 293 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 CCDC39Q9UFE4 941 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 PIAS3Q9Y6X2 628 aa30.61■■■□□ 2.49
CBX4-202ENST00000448310 NUP210Q8TEM1 1887 aaPredicted RBP30.61■■■□□ 2.49
CBX4-202ENST00000448310 MYMKA6NI61 221 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 MAN2B1O00754 1011 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 ZNF263O14978 683 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 CRELD2Q6UXH1 353 aaPredicted RBP30.6■■■□□ 2.49
CBX4-202ENST00000448310 DNAJB7Q7Z6W7 309 aaPredicted RBP30.6■■■□□ 2.49
CBX4-202ENST00000448310 MFSD6LQ8IWD5 586 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 EFCAB13Q8IY85 973 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 ZNF687Q8N1G0 1237 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 POMGNT1Q8WZA1 660 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 GPR88Q9GZN0 384 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 DPP3Q9NY33 737 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 STK17AQ9UEE5 414 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 C2CD2Q9Y426 696 aa30.6■■■□□ 2.49
CBX4-202ENST00000448310 DMXL1Q9Y485 3027 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 PPP1R37O75864 691 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 CYP11A1P05108 521 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 PDCP20941 246 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 ADSSP30520 456 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 KCNA1Q09470 495 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 MTAPQ13126 283 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 SLC39A12Q504Y0 691 aa30.59■■■□□ 2.49
CBX4-202ENST00000448310 RRAGBQ5VZM2 374 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms