RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 CPA5Q8WXQ8 436 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 HSPH1Q92598 858 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 SIK3Q9Y2K2 1263 aa8.25□□□□□ -1.09
SMG1-202ENST00000446231 TNRQ92752 1358 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 OATP04181 439 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 SLC5A9Q2M3M2 681 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 HEXIM2Q96MH2 286 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 OSBPL6Q9BZF3 934 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 OVOS2A0A0G2JMS6 1433 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PHGDHO43175 533 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 PODNQ7Z5L7 613 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.094e-9■■■□□ 17.5
SMG1-202ENST00000446231 BLOC1S6Q9UL45 172 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 MEI4A8MW99 385 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 AMNQ9BXJ7 453 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 C6orf203Q9P0P8 240 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 BTNL10A8MVZ5 291 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 S100A1P23297 94 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 FASTKD1Q53R41 847 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 EAPPQ56P03 285 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 C11orf63Q6NUN7 778 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 ZNF555Q8NEP9 628 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PCMTD2Q9NV79 361 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 CAB39Q9Y376 341 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 TBC1D4O60343 1298 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 CDH3P22223 829 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 S100A5P33763 92 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 VCPP55072 806 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 DNAAF3Q8N9W5 541 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 TMEM79Q9BSE2 394 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 C20orf96Q9NUD7 363 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 AFF2P51816 1311 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 NAA20P61599 178 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 ZNF618Q5T7W0 954 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 HEATR4Q86WZ0 1026 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PCYOX1Q9UHG3 505 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 CAPN1P07384 714 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 HSPA1AP0DMV8 641 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 HSPA1BP0DMV9 641 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 NCKAP1LP55160 1127 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 KRT76Q01546 638 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 ECHDC2Q86YB7 292 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 TLCD1Q96CP7 247 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 MRPL11Q9Y3B7 192 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 CFBP00751 764 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 SERPINB9P50453 376 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 TFDP2Q14188 446 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PLEKHG4BQ96PX9 1271 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 CCDC90BQ9GZT6 254 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 SFI1A8K8P3 1242 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 ENO3P13929 434 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 NRDE2Q9H7Z3 1164 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 APEX2Q9UBZ4 518 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 CTTNBP2Q8WZ74 1663 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 KPNA7A9QM74 516 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 NEDD8Q15843 81 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 HABP4Q5JVS0 413 aaKnown RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 MICU2Q8IYU8 434 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 USP46P62068 366 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 CHRNDQ07001 517 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 ENOSF1Q7L5Y1 443 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PPIL6Q8IXY8 311 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 ZNF180Q9UJW8 692 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 AKAP10O43572 662 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 HOXA13P31271 388 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 CASP5P51878 434 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 SCARF1Q14162 830 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 DEFB107AQ8IZN7 70 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 ART4Q93070 314 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 DENND2DQ9H6A0 471 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 CEBPAP49715 358 aaPredicted RBP8.24□□□□□ -1.09
SMG1-202ENST00000446231 NR1D2Q14995 579 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 KRT72Q14CN4 511 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 NBPF15Q8N660 670 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 SPATA17Q96L03 361 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 PCSK1NQ9UHG2 260 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 AFG3L2Q9Y4W6 797 aa8.24□□□□□ -1.09
SMG1-202ENST00000446231 SORBS3O60504 671 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 EGFLAMQ63HQ2 1017 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TMEM117Q9H0C3 514 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 LINGO3P0C6S8 592 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 ANPEPP15144 967 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 PHKG2P15735 406 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 RPA3P35244 121 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 ATXN3P54252 364 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 RGS21Q2M5E4 152 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 CLVS1Q8IUQ0 354 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 INPP4AQ96PE3 977 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 SMAPO00193 183 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 ABCE1P61221 599 aaKnown RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 SGSM1Q2NKQ1 1148 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 DCDC2CA8MYV0 355 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 GOLGA8TH3BQL2 631 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 CCDC153Q494R4 210 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TLDC1Q6P9B6 456 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TCP10LQ8TDR4 215 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms