RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 MAPK6Q16659 721 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 HSDL1Q3SXM5 330 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 ARMC9Q7Z3E5 817 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 RNF149Q8NC42 400 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 ATXN2LQ8WWM7 1075 aaKnown RBP18.91■□□□□ 0.62
CLDN9-201ENST00000445369 TRAIPQ9BWF2 469 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 STMN4Q9H169 189 aaPredicted RBP18.91■□□□□ 0.62
CLDN9-201ENST00000445369 DDX20Q9UHI6 824 aaKnown RBP18.91■□□□□ 0.62
CLDN9-201ENST00000445369 USTQ9Y2C2 406 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 TMEM191CA6NGB0 347 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 CALB1P05937 261 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 TMEM191BP0C7N4 346 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 SRGAP2CP0DJJ0 459 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 PROZP22891 400 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 LIG3P49916 1009 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 ZNF252P-AS1Q0IIN9 211 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 SURF1Q15526 300 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 TRIP13Q15645 432 aaPredicted RBP18.91■□□□□ 0.62
CLDN9-201ENST00000445369 DUOXA2Q1HG44 320 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 LRRC71Q8N4P6 559 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 SELENOSQ9BQE4 189 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 ASCC2Q9H1I8 757 aaPredicted RBP18.91■□□□□ 0.62
CLDN9-201ENST00000445369 CISHQ9NSE2 258 aa18.91■□□□□ 0.62
CLDN9-201ENST00000445369 HOXC6P09630 235 aa18.9■□□□□ 0.62
CLDN9-201ENST00000445369 BRD2P25440 801 aaKnown RBP18.9■□□□□ 0.62
CLDN9-201ENST00000445369 GJC1P36383 396 aa18.9■□□□□ 0.62
CLDN9-201ENST00000445369 SLCO1A2P46721 670 aa18.9■□□□□ 0.62
CLDN9-201ENST00000445369 SGSM1Q2NKQ1 1148 aa18.9■□□□□ 0.62
CLDN9-201ENST00000445369 CELF3Q5SZQ8 465 aaKnown RBP18.9■□□□□ 0.62
CLDN9-201ENST00000445369 PLPPR4Q7Z2D5 763 aa18.9■□□□□ 0.62
CLDN9-201ENST00000445369 C2orf40Q9H1Z8 148 aa18.9■□□□□ 0.62
CLDN9-201ENST00000445369 ADM5C9JUS6 153 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 SLC25A27O95847 323 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 PLCB4Q15147 1175 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 EXOC8Q8IYI6 725 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 OTUD6BQ8N6M0 293 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.62
CLDN9-201ENST00000445369 FAM212AQ96EL1 285 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 SCLT1Q96NL6 688 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 MPHOSPH6Q99547 160 aaKnown RBP18.89■□□□□ 0.62
CLDN9-201ENST00000445369 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.62
CLDN9-201ENST00000445369 ACSL3O95573 720 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 PGK2P07205 417 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 DRD4P21917 467 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 CDH5P33151 784 aaPredicted RBP18.89■□□□□ 0.61
CLDN9-201ENST00000445369 NF2P35240 595 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 ADCY8P40145 1251 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 SSR1P43307 286 aaKnown RBP18.89■□□□□ 0.61
CLDN9-201ENST00000445369 NFX1Q12986 1120 aaKnown RBP18.89■□□□□ 0.61
CLDN9-201ENST00000445369 MPZL3Q6UWV2 235 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 TSHZ1Q6ZSZ6 1077 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 PACS2Q86VP3 889 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 CHMP6Q96FZ7 201 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 FAM118BQ9BPY3 351 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 ELP3Q9H9T3 547 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 ANAPC5Q9UJX4 755 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 PCDHGC3Q9UN70 934 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
CLDN9-201ENST00000445369 NOP56O00567 594 aaKnown RBP18.88■□□□□ 0.61
CLDN9-201ENST00000445369 TTC4O95801 387 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 TCF4P15884 667 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ASPAP45381 313 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 TTC31Q49AM3 519 aaPredicted RBP18.88■□□□□ 0.61
CLDN9-201ENST00000445369 PPP1R15BQ5SWA1 713 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 SMYD5Q6GMV2 418 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 CCDC89Q8N998 374 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 TMEM35BQ8NCS4 154 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 RBM41Q96IZ5 413 aaKnown RBP18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ZNF317Q96PQ6 595 aaPredicted RBP18.88■□□□□ 0.61
CLDN9-201ENST00000445369 SLITRK1Q96PX8 696 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ZNF518BQ9C0D4 1074 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 XYLT2Q9H1B5 865 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 TXNRD2Q9NNW7 524 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 KLRC2P26717 231 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 OGDHQ02218 1023 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 IFT88Q13099 833 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 TRPC3Q13507 836 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 LONRF1Q17RB8 773 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ZNF699Q32M78 642 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ATP13A4Q4VNC1 1196 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ZNF394Q53GI3 561 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 LRRC38Q5VT99 294 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 GPAT2Q6NUI2 795 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 DNAJC24Q6P3W2 148 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 ZNF365Q70YC5 407 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 RHPN2Q8IUC4 686 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 RCOR2Q8IZ40 523 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 BBOF1Q8ND07 529 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 SEC16BQ96JE7 1060 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 SERPINB12Q96P63 405 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 MCEEQ96PE7 176 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 FZD8Q9H461 694 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 CCDC134Q9H6E4 229 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 KLHL11Q9NVR0 708 aa18.88■□□□□ 0.61
CLDN9-201ENST00000445369 DNAJC25-GNG10A0A024R161 153 aa18.87■□□□□ 0.61
CLDN9-201ENST00000445369 ACKR2O00590 384 aa18.87■□□□□ 0.61
CLDN9-201ENST00000445369 B4GALT4O60513 344 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms