RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ABCF3Q9NUQ8 709 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 ZNF212Q9UDV6 495 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 ITGB1BP2Q9UKP3 347 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 M0QYV0 167 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 CSF1RP07333 972 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 COMTP21964 271 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 RAB14P61106 215 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 IFNEQ86WN2 208 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 EPS8L3Q8TE67 593 aaKnown RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 TMEM260Q9NX78 707 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 YY1P25490 414 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 TPP2P29144 1249 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 NSUN4Q96CB9 384 aaKnown RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 CDV3Q9UKY7 258 aaKnown RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 ADGRA3Q8IWK6 1321 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 DENND3A2RUS2 1198 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 QARSP47897 775 aaKnown RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 SESN2P58004 480 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 GPSM2P81274 684 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 STK4Q13043 487 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 SMAD1Q15797 465 aaKnown RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 ADGRF4Q8IZF3 695 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 ZNF483Q8TF39 744 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 NR1H4Q96RI1 486 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 CPVLQ9H3G5 476 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 FAM153AQ9UHL3 310 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 STAP1Q9ULZ2 295 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 TFR2Q9UP52 801 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 PLAGL2Q9UPG8 496 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 CAB39Q9Y376 341 aaPredicted RBP19.49■□□□□ 0.71
SHANK3-203ENST00000445220 KCNJ1P48048 391 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 DMGDHQ9UI17 866 aaKnown RBP19.48■□□□□ 0.71
SHANK3-203ENST00000445220 AGLP35573 1532 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 KCNN4O15554 427 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 APRTP07741 180 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 ATP6V1E1P36543 226 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 OVGP1Q12889 678 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 CEP78Q5JTW2 689 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 PARD3BQ8TEW8 1205 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 FAM192AQ9GZU8 254 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 RAB6BQ9NRW1 208 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 OASLQ15646 514 aaKnown RBP19.48■□□□□ 0.71
SHANK3-203ENST00000445220 FAM102AQ5T9C2 384 aaPredicted RBP19.48■□□□□ 0.71
SHANK3-203ENST00000445220 EEPD1Q7L9B9 569 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 JADE3Q92613 823 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 TRAPPC9Q96Q05 1148 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 NEUROG2Q9H2A3 272 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 DHX35Q9H5Z1 703 aaKnown RBP19.48■□□□□ 0.71
SHANK3-203ENST00000445220 ZNF609O15014 1411 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 SLC26A4O43511 780 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 MYL2P10916 166 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 MAPK6Q16659 721 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 TRMT5Q32P41 509 aaKnown RBP19.48■□□□□ 0.71
SHANK3-203ENST00000445220 IRGCQ6NXR0 463 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 ZNF34Q8IZ26 560 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 ZKSCAN4Q969J2 545 aaPredicted RBP19.48■□□□□ 0.71
SHANK3-203ENST00000445220 PPP2R3CQ969Q6 453 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 DIABLOQ9NR28 239 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 AIPL1Q9NZN9 384 aa19.48■□□□□ 0.71
SHANK3-203ENST00000445220 RARGP13631 454 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 EDRF1Q3B7T1 1238 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 PREPLQ4J6C6 727 aaPredicted RBP19.47■□□□□ 0.71
SHANK3-203ENST00000445220 PARVBQ9HBI1 364 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 EXOSC4Q9NPD3 245 aaKnown RBP19.47■□□□□ 0.71
SHANK3-203ENST00000445220 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 PPP1R3GB7ZBB8 358 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 ZBTB24O43167 697 aaPredicted RBP19.47■□□□□ 0.71
SHANK3-203ENST00000445220 TDP2O95551 362 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 UGP2Q16851 508 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 PID1Q7Z2X4 250 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 IFT43Q96FT9 208 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 FAM210AQ96ND0 272 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 SENP7Q9BQF6 1050 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 PHF20Q9BVI0 1012 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 LZTS3O60299 673 aaPredicted RBP19.47■□□□□ 0.71
SHANK3-203ENST00000445220 TMC5Q6UXY8 1006 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 NDUFAF2Q8N183 169 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.47■□□□□ 0.71
SHANK3-203ENST00000445220 MPP4Q96JB8 637 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 NLRP4Q96MN2 994 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 MYO3AQ8NEV4 1616 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 NEXMIFQ5QGS0 1516 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 FMO5P49326 533 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 PLEKHA7Q6IQ23 1121 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 LUZP2Q86TE4 346 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 FUKQ8N0W3 1084 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 KLHL11Q9NVR0 708 aa19.47■□□□□ 0.71
SHANK3-203ENST00000445220 USP1O94782 785 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 NUDT2P50583 147 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 KRT72Q14CN4 511 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 RNF146Q9NTX7 359 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 AP3B1O00203 1094 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 SASH3O75995 380 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 KLK7P49862 253 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 FOXR1Q6PIV2 292 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 HOMEZQ8IX15 550 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 OR6P1Q8NGX9 317 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 TPCN2Q8NHX9 752 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms