RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LRRC63Q05C16 580 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 BIRC3Q13489 604 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 TRPC3Q13507 836 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 TMC5Q6UXY8 1006 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 INTS8Q75QN2 995 aaKnown RBP18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 CXorf38Q8TB03 319 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 PLEKHO2Q8TD55 490 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 TMC2Q8TDI7 906 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 HPDLQ96IR7 371 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 RIPOR3Q96MK2 946 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 GZF1Q9H116 711 aaPredicted RBP18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 NUP62CLQ9H1M0 184 aa18.79■□□□□ 0.6
SMARCAL1-209ENST00000444508 OR6C75A6NL08 312 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 LRRIQ3A6PVS8 624 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 HUS1O60921 280 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 AKAP3O75969 853 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 CYP11A1P05108 521 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 CPB1P15086 417 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 CCNE1P24864 410 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 MTHFRP42898 656 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 FKBP3Q00688 224 aaKnown RBP18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 ROR1Q01973 937 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 CBX2Q14781 532 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 ATAT1Q5SQI0 421 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 ANKRD40Q6AI12 368 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 KLHL10Q6JEL2 608 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 THEM5Q8N1Q8 247 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 CMASQ8NFW8 434 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 ZNF461Q8TAF7 563 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 BORCS6Q96GS4 357 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 NECTIN4Q96NY8 510 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 UHRF1Q96T88 793 aaPredicted RBP18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 MKNK1Q9BUB5 465 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 ZDHHC7Q9NXF8 308 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 PRKAG3Q9UGI9 489 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 SNX9Q9Y5X1 595 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 TTC28Q96AY4 2481 aa18.78■□□□□ 0.6
SMARCAL1-209ENST00000444508 TSC2P49815 1807 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 CCDC195A0A1B0GUA6 201 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 IKBKBO14920 756 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 BMP6P22004 513 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 ELF1P32519 619 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 VAMP7P51809 220 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 CLDN10P78369 228 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 TPGS2Q68CL5 300 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 C15orf39Q6ZRI6 1047 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 CCDC149Q6ZUS6 474 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 NELFBQ8WX92 580 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 SUSD6Q92537 303 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 ZNF516Q92618 1163 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 GDAP2Q9NXN4 497 aa18.77■□□□□ 0.6
SMARCAL1-209ENST00000444508 WDR27A2RRH5 827 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 TRIM49BA6NDI0 452 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 PPP1R3GB7ZBB8 358 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 SLC16A3O15427 465 aaKnown RBP18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 RFPL2O75678 378 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZMYND10O75800 440 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 ABLIM3O94929 683 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 CLSTN1O94985 981 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 C8AP07357 584 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 PMS1P54277 932 aaKnown RBP18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 DLG4P78352 724 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 ENPEPQ07075 957 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 UVSSAQ2YD98 709 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 PPM1LQ5SGD2 360 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 WSCD1Q658N2 575 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 SCARA3Q6AZY7 606 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 CYP26C1Q6V0L0 522 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 GPR149Q86SP6 731 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 TMEM86AQ8N2M4 240 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 TOP6BLQ8N6T0 577 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 SLC7A14Q8TBB6 771 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 EEF2KMTQ96G04 330 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 CTNND2Q9UQB3 1225 aa18.76■□□□□ 0.59
SMARCAL1-209ENST00000444508 BDP1A6H8Y1 2624 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 PRRG1O14668 218 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 CST3P01034 146 aaPredicted RBP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 HNRNPA1P09651 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 WEE2P0C1S8 567 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 ATF2P15336 505 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 TDRD10Q5VZ19 366 aaKnown RBP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 RTL10Q7L3V2 364 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 ADHFE1Q8IWW8 467 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 SMG7Q92540 1137 aaKnown RBP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 SYAP1Q96A49 352 aaPredicted RBP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 PHF7Q9BWX1 381 aaPredicted RBP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 PRKD2Q9BZL6 878 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 PIDD1Q9HB75 910 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 AFF4Q9UHB7 1163 aaKnown RBP18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 MAFFQ9ULX9 164 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 L1RE1Q9UN81 338 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 NCOR1O75376 2440 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 CUL9Q8IWT3 2517 aa18.75■□□□□ 0.59
SMARCAL1-209ENST00000444508 VCANP13611 3396 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 STX10O60499 249 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 XYLBO75191 536 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms