RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 POLIQ9UNA4 740 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 SNX9Q9Y5X1 595 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 BACE2Q9Y5Z0 518 aa13.14□□□□□ -0.31
SLC48A1-202ENST00000442892 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 PRRG1O14668 218 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 RFPL2O75678 378 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 BMP6P22004 513 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 CCNE1P24864 410 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 ELF1P32519 619 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 PPP1R2P41236 205 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 PIK3CAP42336 1068 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 AARSP49588 968 aaKnown RBP eCLIP13.13□□□□□ -0.311e-7■■■■■ 69.8
SLC48A1-202ENST00000442892 TNNC1P63316 161 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 ROR1Q01973 937 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 EDRF1Q3B7T1 1238 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 ZCWPW2Q504Y3 356 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 WSCD1Q658N2 575 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 CENPPQ6IPU0 288 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 TMEM184AQ6ZMB5 413 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 INTS8Q75QN2 995 aaKnown RBP13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 GPR65Q8IYL9 337 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 SLC7A14Q8TBB6 771 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 ZNF516Q92618 1163 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 ELMO3Q96BJ8 720 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 PGLYRP2Q96PD5 576 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 MMS19Q96T76 1030 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 DSEQ9UL01 958 aa13.13□□□□□ -0.31
SLC48A1-202ENST00000442892 CCDC195A0A1B0GUA6 201 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 BICDL2A1A5D9 508 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 WDR27A2RRH5 827 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 CCL16O15467 120 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 C8AP07357 584 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 BMP1P13497 986 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 TYMPP19971 482 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 PAX3P23760 479 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 GCLMP48507 274 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 MYL6P60660 151 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 FKBP3Q00688 224 aaKnown RBP13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 LRRC63Q05C16 580 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 ADCY1Q08828 1119 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 PAK1Q13153 545 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 RAB33AQ14088 237 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 NFIL3Q16649 462 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 CCDC40Q4G0X9 1142 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 FEZF2Q8TBJ5 459 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 TMEM209Q96SK2 561 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 CYP4F11Q9HBI6 524 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 FBXW11Q9UKB1 542 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
SLC48A1-202ENST00000442892 MYH10P35580 1976 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 OR6C75A6NL08 312 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 CST3P01034 146 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 ACAT1P24752 427 aaKnown RBP13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 AP3M2P53677 418 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 ITIH3Q06033 890 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 NCOA4Q13772 614 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 ZNF699Q32M78 642 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 ATAT1Q5SQI0 421 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 SMG7Q92540 1137 aaKnown RBP13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 ADAM7Q9H2U9 754 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
SLC48A1-202ENST00000442892 MAPK13O15264 365 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 OAZ2O95190 189 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 MBD3O95983 291 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 LRG1P02750 347 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 MTHFRP42898 656 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 MYL7Q01449 175 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 TSPY1Q01534 308 aa13.1□□□□□ -0.31
SLC48A1-202ENST00000442892 SMAD2Q15796 467 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms