RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 GLUD2P49448 558 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 RTP2Q5QGT7 225 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 ZNF697Q5TEC3 545 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 PLPP4Q5VZY2 271 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 RRAGAQ7L523 313 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 DDX53Q86TM3 631 aaKnown RBP14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 METTL23Q86XA0 190 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 PDCL2Q8N4E4 241 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 APPL2Q8NEU8 664 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 AUTS2Q8WXX7 1259 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 RIN2Q8WYP3 895 aaPredicted RBP14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 TATDN2Q93075 761 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 FAM161BQ96MY7 647 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 ARID3AQ99856 593 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 TCF25Q9BQ70 676 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 TTPALQ9BTX7 342 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 ZBP1Q9H171 429 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 VRTNQ9H8Y1 702 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 FAM207AQ9NSI2 230 aaPredicted RBP14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 COL4A4P53420 1690 aaPredicted RBP14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 CEP290O15078 2479 aa14.54□□□□□ -0.08
TM9SF4-204ENST00000442842 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 ARHGEF37A1IGU5 675 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 GOLGA6L3A6NEY3 463 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 M0QZQ0 153 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 PAX3P23760 479 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 DNAJB1P25685 340 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 CDH8P55286 799 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 KCNMA1Q12791 1236 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 CUL2Q13617 745 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 USP41Q3LFD5 358 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 VARS2Q5ST30 1063 aaKnown RBP14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 WSCD1Q658N2 575 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 OVOS1Q6IE37 1185 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 PRSS55Q6UWB4 352 aaPredicted RBP14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 TMC7Q7Z402 723 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 RNF168Q8IYW5 571 aaPredicted RBP14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 LMO3Q8TAP4 145 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 SPPL3Q8TCT6 385 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 KAT5Q92993 513 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 MRPL45Q9BRJ2 306 aaKnown RBP14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 TRIM5Q9C035 493 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 SDCBP2Q9H190 292 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 TLR9Q9NR96 1032 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 APEX2Q9UBZ4 518 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 STK39Q9UEW8 545 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 PCDHGC5Q9Y5F6 944 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 PDE4DIPQ5VU43 2346 aa14.53□□□□□ -0.08
TM9SF4-204ENST00000442842 NLRC5Q86WI3 1866 aa14.52□□□□□ -0.08
TM9SF4-204ENST00000442842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 SYN3O14994 580 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 AP5Z1O43299 807 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 HCRTO43612 131 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 WEE2P0C1S8 567 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 FGFR3P22607 806 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 YWHAHQ04917 246 aaPredicted RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 UBE3AQ05086 875 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 ORC1Q13415 861 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 NR1I3Q14994 352 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 PSMD5Q16401 504 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 ARHGAP44Q17R89 818 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 ZNF280DQ6N043 979 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 SARM1Q6SZW1 724 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 OSTM1Q86WC4 334 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 NEK11Q8NG66 645 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 OR6B3Q8NGW1 331 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 MICAL1Q8TDZ2 1067 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 TTYH1Q9H313 450 aaPredicted RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 SNX25Q9H3E2 840 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 SIX2Q9NPC8 291 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 UBE2TQ9NPD8 197 aaPredicted RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 DDX43Q9NXZ2 648 aaKnown RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 AJAP1Q9UKB5 411 aaPredicted RBP14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 DSEQ9UL01 958 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 LZTS1Q9Y250 596 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 SIK3Q9Y2K2 1263 aa14.52□□□□□ -0.09
TM9SF4-204ENST00000442842 TRIP11Q15643 1979 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 TMEM265A0A087WTH1 108 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 LPXNO60711 386 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 CTSAP10619 480 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 RPL17P18621 184 aaKnown RBP14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 TYMPP19971 482 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 TBXAS1P24557 533 aaPredicted RBP14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 ACAT1P24752 427 aaKnown RBP14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 IRS1P35568 1242 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 ARPP19P56211 112 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 ERVFC1P60507 584 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 DSG1Q02413 1049 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 RAPGEF1Q13905 1077 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 SMC1AQ14683 1233 aaKnown RBP14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 PTPN14Q15678 1187 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 UVSSAQ2YD98 709 aa14.51□□□□□ -0.09
TM9SF4-204ENST00000442842 IQCEQ6IPM2 695 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms