RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 REXO2Q9Y3B8 237 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 PCDHA13Q9Y5I0 950 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 A0A087X0T9 212 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 CFAP99D6REC4 459 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF263O14978 683 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 FAM228BP0C875 321 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 TNNT1P13805 278 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 MAGEA1P43355 309 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ASPAP45381 313 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 MYL6P60660 151 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 OSTNP61366 133 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 CDR2Q01850 454 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ISCUQ9H1K1 167 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
NR1I3-211ENST00000442691 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 SNTG2Q9NY99 539 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
NR1I3-211ENST00000442691 ANK1P16157 1881 aa9.71□□□□□ -0.85
NR1I3-211ENST00000442691 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 DDX3XO00571 662 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 LRRN2O75325 713 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 ITGB3P05106 788 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 CTSHP09668 335 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 ITGA4P13612 1032 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 CYP11B1P15538 503 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 RPL9P32969 192 aaKnown RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 RFC2P35250 354 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 GJA8P48165 433 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 TERF1P54274 439 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 ARID5AQ03989 594 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 MTFR1Q15390 333 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 STILQ15468 1287 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 SV2CQ496J9 727 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 H2AFVQ71UI9 128 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 OLIG1Q8TAK6 271 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 PRR7Q8TB68 274 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 U2AF1L4Q8WU68 220 aaKnown RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 DDX1Q92499 740 aaKnown RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 SECISBP2LQ93073 1101 aaKnown RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 VCPIP1Q96JH7 1222 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 UROC1Q96N76 676 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 PI4K2AQ9BTU6 479 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 ZNF518BQ9C0D4 1074 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
NR1I3-211ENST00000442691 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 UMODL1Q5DID0 1318 aa9.71□□□□□ -0.86
NR1I3-211ENST00000442691 PIRO00625 290 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 CYP26A1O43174 497 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 MED7O43513 233 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 RTN2O75298 545 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 TACC1O75410 805 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 CXCL10P02778 98 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 MYBL1P10243 752 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 GHRP10912 638 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 KRT5P13647 590 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
NR1I3-211ENST00000442691 CD52P31358 61 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 TNNC1P63316 161 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 FAM189BP81408 668 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 GFPT1Q06210 699 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-211ENST00000442691 NFX1Q12986 1120 aaKnown RBP9.7□□□□□ -0.86
NR1I3-211ENST00000442691 GRIK3Q13003 919 aa9.7□□□□□ -0.86
NR1I3-211ENST00000442691 WDR72Q3MJ13 1102 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms