RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TAF6P49848 677 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 MYBPC2Q14324 1141 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 SCARA3Q6AZY7 606 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 UNC13DQ70J99 1090 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 OR10T2Q8NGX3 314 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 TMEM209Q96SK2 561 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 RTP3Q9BQQ7 232 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 PCIF1Q9H4Z3 704 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 SLC2A4RGQ9NR83 387 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 FAM13BQ9NYF5 915 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 RBAKQ9NYW8 714 aaPredicted RBP20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 MRPS23Q9Y3D9 190 aaKnown RBP20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 DENND4CQ5VZ89 1909 aa20.45■□□□□ 0.86
HMGB3P22-201ENST00000442010 KRBA1A5PL33 1030 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 NRG2O14511 850 aaPredicted RBP20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 KIAA0391O15091 583 aaKnown RBP20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 CFHP08603 1231 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 CCR2P41597 374 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 CLCN5P51795 746 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 NUBP1P53384 320 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 TWF1Q12792 350 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 FAM26FQ5R3K3 315 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 ASTLQ6HA08 431 aaPredicted RBP20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 ARMCX5Q6P1M9 558 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 STXBP4Q6ZWJ1 553 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 GPD1LQ8N335 351 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 C1orf127Q8N9H9 656 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 ING5Q8WYH8 240 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 CHAMP1Q96JM3 812 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 PGLYRP2Q96PD5 576 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 BLZF1Q9H2G9 400 aa20.44■□□□□ 0.86
HMGB3P22-201ENST00000442010 MTMR11A4FU01 709 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 CYB561D2O14569 222 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 TGFB1I1O43294 461 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 MOSPD3O75425 235 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 MICAL2O94851 1124 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 CEBPBP17676 345 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 EPHA5P54756 1037 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 CUL4BQ13620 913 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 CENPPQ6IPU0 288 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 MTSS1LQ765P7 747 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 SIX5Q8N196 739 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 GPR152Q8TDT2 470 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 TCEAL4Q96EI5 215 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 FAM84AQ96KN4 292 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 CORO1BQ9BR76 489 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 PDE11AQ9HCR9 933 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 GDE1Q9NZC3 331 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 FBXL21Q9UKT6 434 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 DSEQ9UL01 958 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 YIPF1Q9Y548 306 aa20.43■□□□□ 0.86
HMGB3P22-201ENST00000442010 PVALEFA0A1B0GWK0 134 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 KPNA7A9QM74 516 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 ACTN4O43707 911 aaKnown RBP20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 TFAMQ00059 246 aaKnown RBP20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 DUSP4Q13115 394 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 HS6ST3Q8IZP7 471 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 ATAD1Q8NBU5 361 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 LEO1Q8WVC0 666 aaPredicted RBP20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 SCFD1Q8WVM8 642 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 PYM1Q9BRP8 204 aaKnown RBP20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 LRRC3Q9BY71 257 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 ZCWPW1Q9H0M4 648 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 DNAJC25Q9H1X3 360 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 MFSD1Q9H3U5 465 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 HSFX1Q9UBD0 423 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 MIA3Q5JRA6 1907 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 UBE4BO95155 1302 aa20.42■□□□□ 0.86
HMGB3P22-201ENST00000442010 PI15O43692 258 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 ITGB3P05106 788 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 AOC1P19801 751 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 POLR2BP30876 1174 aaKnown RBP20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 AFMP43652 599 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 PTPN5P54829 565 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 SV2CQ496J9 727 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 WSCD1Q658N2 575 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 CBWD2Q8IUF1 395 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 MCRS1Q96EZ8 462 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 ZNF512Q96ME7 567 aaPredicted RBP20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 ZNF560Q96MR9 790 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 SERTAD1Q9UHV2 236 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 SIX4Q9UIU6 781 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 HPSEQ9Y251 543 aa20.41■□□□□ 0.86
HMGB3P22-201ENST00000442010 ZNF197O14709 1029 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 GALR2O43603 387 aaPredicted RBP20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 KLRC4O43908 158 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 OBSL1O75147 1896 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 CMA1P23946 247 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 PNPLA4P41247 253 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 GPC5P78333 572 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 COL4A3Q01955 1670 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 PTPRJQ12913 1337 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 BMT2Q1RMZ1 405 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 IQCEQ6IPM2 695 aa20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 PDZD4Q76G19 769 aaPredicted RBP20.4■□□□□ 0.86
HMGB3P22-201ENST00000442010 LRRTM3Q86VH5 581 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms