RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NAA30Q147X3 362 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 LONRF2Q1L5Z9 754 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SV2CQ496J9 727 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 WDR93Q6P2C0 686 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 DCUN1D2Q6PH85 259 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 FBXO38Q6PIJ6 1188 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SESTD1Q86VW0 696 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 UBR7Q8N806 425 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SLAIN1Q8ND83 568 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 COG1Q8WTW3 980 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 HNRNPLLQ8WVV9 542 aaKnown RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 ZNF606Q8WXB4 792 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ARID3AQ99856 593 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 NCAPGQ9BPX3 1015 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 BCO2Q9BYV7 579 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SLITRK6Q9H5Y7 841 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SNTG2Q9NY99 539 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 HESX1Q9UBX0 185 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 IP6K2Q9UHH9 426 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 RAB21Q9UL25 225 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 BARX2Q9UMQ3 279 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 STXBP5LQ9Y2K9 1186 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ALG6Q9Y672 507 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CDY2AQ9Y6F7 541 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ZNF185O15231 689 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 FKTNO75072 461 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 RECQL4O94761 1208 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CST3P01034 146 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 IGHA2P01877 340 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 FAM163BP0C2L3 166 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 UNGP13051 313 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 ITGA4P13612 1032 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 FGFR4P22455 802 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CXCR5P32302 372 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PAK2Q13177 524 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 CXCL17Q6UXB2 119 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 HDXQ7Z353 690 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 RPAINQ86UA6 219 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 USP38Q8NB14 1042 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ARRDC4Q8NCT1 418 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 LRRN4CLQ8ND94 238 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PXYLP1Q8TE99 480 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 PGBD4Q96DM1 585 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 HES6Q96HZ4 224 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 GLT1D1Q96MS3 346 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ZSWIM1Q9BR11 485 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 NT5C1AQ9BXI3 368 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 LHX5Q9H2C1 402 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 SNX25Q9H3E2 840 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 ABCB6Q9NP58 842 aa6.41□□□□□ -1.38
VPS50-205ENST00000441602 DDX20Q9UHI6 824 aaKnown RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 TTC7AQ9ULT0 858 aaPredicted RBP6.41□□□□□ -1.38
VPS50-205ENST00000441602 UMODL1Q5DID0 1318 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 MOXD2PA6NHM9 499 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 AOC2O75106 756 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 PGK1P00558 417 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 WEE2P0C1S8 567 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 BRD2P25440 801 aaKnown RBP6.4□□□□□ -1.38
VPS50-205ENST00000441602 HOXC8P31273 242 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 MAN1A1P33908 653 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 SSR1P43307 286 aaKnown RBP6.4□□□□□ -1.38
VPS50-205ENST00000441602 CLCN6P51797 869 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 CACNB2Q08289 660 aaPredicted RBP6.4□□□□□ -1.38
VPS50-205ENST00000441602 UNC93AQ86WB7 457 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 TRPV1Q8NER1 839 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 FEZF2Q8TBJ5 459 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.4□□□□□ -1.385e-8■■■■■ 65.3
VPS50-205ENST00000441602 CYFIP2Q96F07 1278 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 TMEM176AQ96HP8 235 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 HEXIM2Q96MH2 286 aaKnown RBP6.4□□□□□ -1.38
VPS50-205ENST00000441602 TSEN34Q9BSV6 310 aaKnown RBP6.4□□□□□ -1.38
VPS50-205ENST00000441602 XYLT2Q9H1B5 865 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 OSGEPQ9NPF4 335 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 CNTN3Q9P232 1028 aa6.4□□□□□ -1.38
VPS50-205ENST00000441602 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
VPS50-205ENST00000441602 PROSCO94903 275 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 IQCF3P0C7M6 154 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 KCNE1P15382 129 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 COMTP21964 271 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 GBP1P32455 592 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 TNNT3P45378 269 aaPredicted RBP6.4□□□□□ -1.39
VPS50-205ENST00000441602 ASPAP45381 313 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 TAF6P49848 677 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 SLC8A3P57103 927 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 PTK7Q13308 1070 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 ZFYVE27Q5T4F4 411 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 MMS22LQ6ZRQ5 1243 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 PALB2Q86YC2 1186 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 PASD1Q8IV76 773 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 RASGEF1CQ8N431 466 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 NOA1Q8NC60 698 aaKnown RBP6.4□□□□□ -1.39
VPS50-205ENST00000441602 CPA5Q8WXQ8 436 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 FAM84AQ96KN4 292 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 ARHGAP39Q9C0H5 1083 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 RAB17Q9H0T7 212 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 UBN1Q9NPG3 1134 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 HOMER3Q9NSC5 361 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 RNF216Q9NWF9 866 aaPredicted RBP6.4□□□□□ -1.39
VPS50-205ENST00000441602 SIX4Q9UIU6 781 aa6.4□□□□□ -1.39
VPS50-205ENST00000441602 POLIQ9UNA4 740 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms