RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 GSCP56915 257 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 PURAQ00577 322 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 INCA1Q0VD86 236 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 PTP4A2Q12974 167 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 DHX34Q14147 1143 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MMS22LQ6ZRQ5 1243 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 KLHL7Q8IXQ5 586 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MAIP1Q8WWC4 291 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 ALG3Q92685 438 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 OSMRQ99650 979 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 TRIM6Q9C030 488 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 RAB17Q9H0T7 212 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 SPC25Q9HBM1 224 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 PARVAQ9NVD7 372 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 NXF1Q9UBU9 619 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 DMGDHQ9UI17 866 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 RASAL2Q9UJF2 1139 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MTUS1Q9ULD2 1270 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 SCN10AQ9Y5Y9 1956 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 M0QZ92 97 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 MEFVO15553 781 aaPredicted RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 PHF2O75151 1096 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 CILPO75339 1184 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 CSDE1O75534 798 aaKnown RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 PLA2G4AP47712 749 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 CRYBB1P53674 252 aaPredicted RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 GJA9P57773 515 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 NKX3-2P78367 333 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 GUCY2DQ02846 1103 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 SNX17Q15036 470 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 STILQ15468 1287 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 WDR72Q3MJ13 1102 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 DNAJC24Q6P3W2 148 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 RUFY4Q6ZNE9 571 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 LRRC52Q8N7C0 313 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 C7orf31Q8N865 590 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 C1orf131Q8NDD1 294 aaKnown RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 BEST2Q8NFU1 509 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 CXorf38Q8TB03 319 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 WHAMMQ8TF30 809 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 KRT35Q92764 455 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 HPDLQ96IR7 371 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 ZNF560Q96MR9 790 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 UBXN6Q9BZV1 441 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 DNAI2Q9GZS0 605 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 LHX5Q9H2C1 402 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 MED4Q9NPJ6 270 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 DPP3Q9NY33 737 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 CNTN3Q9P232 1028 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 IP6K2Q9UHH9 426 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 POLIQ9UNA4 740 aa14□□□□□ -0.17
CPSF4-206ENST00000441580 GTF3C5Q9Y5Q8 519 aaPredicted RBP14□□□□□ -0.17
CPSF4-206ENST00000441580 FAM187AA6NFU0 413 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 TMEM88BA6NKF7 163 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 SART1O43290 800 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 CALCAP01258 141 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 CD19P15391 556 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 CHRNA3P32297 505 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 GBP1P32455 592 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 MARCKSL1P49006 195 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 PEX5P50542 639 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 RNASE9P60153 205 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 SLC7A5Q01650 507 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 PTPN11Q06124 597 aaPredicted RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 MAMLD1Q13495 774 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 SMC1AQ14683 1233 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 HSP90B2PQ58FF3 399 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 GSPT2Q8IYD1 628 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 C3orf20Q8ND61 904 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 HDAC7Q8WUI4 952 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 AP1M1Q9BXS5 423 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 MIS12Q9H081 205 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 DDX47Q9H0S4 455 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 SMYD3Q9H7B4 428 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 UBQLN1Q9UMX0 589 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 AGAP1Q9UPQ3 857 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 PIN4Q9Y237 131 aaKnown RBP13.99□□□□□ -0.17
CPSF4-206ENST00000441580 GINS2Q9Y248 185 aa13.99□□□□□ -0.17
CPSF4-206ENST00000441580 THSD7BQ9C0I4 1608 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 TLR3O15455 904 aaKnown RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 ZMYND10O75800 440 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 WEE2P0C1S8 567 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 MYBL2P10244 700 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 VDRP11473 427 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 HOXA11P31270 313 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 RAP1GAPP47736 663 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 FNTAP49354 379 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■■ 40.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms