RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ALDH1A3P47895 512 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 GRIN1Q05586 938 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 SLFN12LQ6IEE8 588 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 CENPPQ6IPU0 288 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 VITQ6UXI7 678 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ERMP1Q7Z2K6 904 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 MFSD6LQ8IWD5 586 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 KRI1Q8N9T8 703 aaKnown RBP12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 SHKBP1Q8TBC3 707 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ZSCAN18Q8TBC5 510 aaPredicted RBP12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 DEPDC1BQ8WUY9 529 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 E2F7Q96AV8 911 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 PGLYRP2Q96PD5 576 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ASB7Q9H672 318 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ZNF334Q9HCZ1 680 aaPredicted RBP12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 PCDHGA2Q9Y5H1 932 aa12.61□□□□□ -0.39
UBE2D4-204ENST00000440899 ANO9A1A5B4 782 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 SHISA7A6NL88 538 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 ANKRD63C9JTQ0 380 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 ZNF263O14978 683 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 SPTLC1O15269 473 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 GJA1P17302 382 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 PDCP20941 246 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 VIPR2P41587 438 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 POU5F1Q01860 360 aaKnown RBP12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 FZD5Q13467 585 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 TMEM132DQ14C87 1099 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 TEAD2Q15562 447 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 ATAD1Q8NBU5 361 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 LRRC3Q9BY71 257 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 HSFX1Q9UBD0 423 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 AGO2Q9UKV8 859 aaKnown RBP12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 NDRG2Q9UN36 371 aaKnown RBP12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 C2CD2Q9Y426 696 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 STYXL1Q9Y6J8 313 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 MIA3Q5JRA6 1907 aa12.6□□□□□ -0.39
UBE2D4-204ENST00000440899 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 CACNA1AO00555 2505 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 COL4A3Q01955 1670 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 A0A1W2PRU2 124 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 MTMR11A4FU01 709 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 HEPACAM2A8MVW5 462 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 PIRO00625 290 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 FGF19O95750 216 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 CYP11A1P05108 521 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 NFICP08651 508 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 ACOT2P49753 483 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 MLLT6P55198 1093 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 CUL4AQ13619 759 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 POSTNQ15063 836 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 ZNF720Q7Z2F6 126 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 METTL23Q86XA0 190 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 TMC8Q8IU68 726 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 YAF2Q8IY57 180 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 KIAA2013Q8IYS2 634 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 ZBTB44Q8NCP5 570 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 FAM3CQ92520 227 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 NELL1Q92832 810 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 PSMG2Q969U7 264 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 HVCN1Q96D96 273 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 EPSTI1Q96J88 318 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 FAM126AQ9BYI3 521 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 ZSCAN32Q9NX65 697 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 STK17AQ9UEE5 414 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 DSEQ9UL01 958 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 SLC27A5Q9Y2P5 690 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 PIAS3Q9Y6X2 628 aa12.59□□□□□ -0.39
UBE2D4-204ENST00000440899 CEP250Q9BV73 2442 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 TISP43B9A030 160 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 CHADO15335 359 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 TUFMP49411 452 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 DNAH14Q0VDD8 3507 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 MTAPQ13126 283 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 DYMQ7RTS9 669 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 DNAJB7Q7Z6W7 309 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 ITIH5Q86UX2 942 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 FANCMQ8IYD8 2048 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 CSGALNACT1Q8TDX6 532 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 TMEM209Q96SK2 561 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 DPP3Q9NY33 737 aa12.58□□□□□ -0.4
UBE2D4-204ENST00000440899 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms