RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ZNF677Q86XU0 584 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 USP38Q8NB14 1042 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TRIM58Q8NG06 486 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 WHAMMQ8TF30 809 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TFAP2BQ92481 460 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 INTUQ9ULD6 942 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TET1Q8NFU7 2136 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TDRD15B5MCY1 1934 aaKnown RBP20.37■□□□□ 0.85
SNX17-203ENST00000440760 ANKRD62A6NC57 917 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 PALMO75781 387 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 P4HA1P13674 534 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 SELPP16109 830 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 IGFBP6P24592 240 aaPredicted RBP20.36■□□□□ 0.85
SNX17-203ENST00000440760 NOP2P46087 812 aaKnown RBP20.36■□□□□ 0.85
SNX17-203ENST00000440760 RAB27AP51159 221 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 RAD23BP54727 409 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 YWHAEP62258 255 aaKnown RBP20.36■□□□□ 0.85
SNX17-203ENST00000440760 PTPROQ16827 1216 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 FBXO46Q6PJ61 603 aaPredicted RBP20.36■□□□□ 0.85
SNX17-203ENST00000440760 MRPL10Q7Z7H8 261 aaKnown RBP20.36■□□□□ 0.85
SNX17-203ENST00000440760 LRRC52Q8N7C0 313 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 ZNF606Q8WXB4 792 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 CPA5Q8WXQ8 436 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 CYFIP2Q96F07 1278 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 ALS2CR12Q96Q35 445 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 ELOVL4Q9GZR5 314 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 CRISPLD2Q9H0B8 497 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 SQORQ9Y6N5 450 aa20.36■□□□□ 0.85
SNX17-203ENST00000440760 A0A0U1RQF3 1178 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 GRID2IPA4D2P6 1211 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 BTNL10A8MVZ5 291 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 PIRO00625 290 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 XPOTO43592 962 aaKnown RBP20.35■□□□□ 0.85
SNX17-203ENST00000440760 CILPO75339 1184 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 C2CD6Q53TS8 623 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 RTN4RL1Q86UN2 441 aaPredicted RBP20.35■□□□□ 0.85
SNX17-203ENST00000440760 RNF10Q8N5U6 811 aaKnown RBP20.35■□□□□ 0.85
SNX17-203ENST00000440760 MRPL45Q9BRJ2 306 aaKnown RBP20.35■□□□□ 0.85
SNX17-203ENST00000440760 NCK2O43639 380 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 NBNO60934 754 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 GZMAP12544 262 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 UNGP13051 313 aaPredicted RBP20.35■□□□□ 0.85
SNX17-203ENST00000440760 CD19P15391 556 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 SLC4A11Q8NBS3 891 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 RFFLQ8WZ73 363 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 RABGGTAQ92696 567 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 TRAIPQ9BWF2 469 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 L2HGDHQ9H9P8 463 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 RSAD1Q9HA92 442 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 CYP3A43Q9HB55 503 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 INPP5FQ9Y2H2 1132 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 GIT1Q9Y2X7 761 aa20.35■□□□□ 0.85
SNX17-203ENST00000440760 KIAA0100Q14667 2235 aaKnown RBP20.35■□□□□ 0.85
SNX17-203ENST00000440760 ZNF623O75123 536 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 FTCDO95954 541 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 NDST1P52848 882 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 NOMO3P69849 1222 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 GPNMBQ14956 572 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 TRIM60Q495X7 471 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 ACAD10Q6JQN1 1059 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 ECHDC2Q86YB7 292 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 LRRN4CLQ8ND94 238 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 SLC35G2Q8TBE7 412 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 ZNF653Q96CK0 615 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 COG5Q9UP83 839 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 NME7Q9Y5B8 376 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 PCDHGC5Q9Y5F6 944 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 HCRTO43612 131 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 CYP1A1P04798 512 aaPredicted RBP20.34■□□□□ 0.85
SNX17-203ENST00000440760 CYP3A5P20815 502 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 BFSP2Q13515 415 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 LLGL2Q6P1M3 1020 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 SLC39A5Q6ZMH5 540 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 PHLDB2Q86SQ0 1253 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 FAXDC2Q96IV6 333 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 ZNF560Q96MR9 790 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 MRFAP1Q9Y605 127 aa20.34■□□□□ 0.85
SNX17-203ENST00000440760 A0A0A6YYK5 440 aaPredicted RBP20.33■□□□□ 0.84
SNX17-203ENST00000440760 CASTOR2A6NHX0 329 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 POMCP01189 267 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 THP07101 528 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 AMPD2Q01433 879 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 INCA1Q0VD86 236 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 TPCN2Q8NHX9 752 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 SCLYQ96I15 445 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 TSPAN18Q96SJ8 248 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 PPP1R12CQ9BZL4 782 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 RGS18Q9NS28 235 aa20.33■□□□□ 0.84
SNX17-203ENST00000440760 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.84
SNX17-203ENST00000440760 PACSIN2Q9UNF0 486 aaPredicted RBP20.33■□□□□ 0.84
SNX17-203ENST00000440760 LRPAP1P30533 357 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 TAF6P49848 677 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 CENPCQ03188 943 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 SOWAHAQ2M3V2 549 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 DPH6Q7L8W6 267 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 ZNF598Q86UK7 904 aaKnown RBP20.32■□□□□ 0.84
SNX17-203ENST00000440760 C1orf131Q8NDD1 294 aaKnown RBP20.32■□□□□ 0.84
SNX17-203ENST00000440760 PSMB7Q99436 277 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 PAAF1Q9BRP4 392 aa20.32■□□□□ 0.84
SNX17-203ENST00000440760 SEZ6LQ9BYH1 1024 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms