RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PHF2O75151 1096 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 PYGMP11217 842 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 P4HA1P13674 534 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.4
SMAD3-202ENST00000439724 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.4
SMAD3-202ENST00000439724 MAN1A1P33908 653 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 FAM193AP78312 1265 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 CYP1B1Q16678 543 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 MREGQ8N565 214 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 FAM71BQ8TC56 605 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 TFAP2BQ92481 460 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 SEC14L1Q92503 715 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 LENG1Q96BZ8 264 aaPredicted RBP12.52□□□□□ -0.4
SMAD3-202ENST00000439724 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 PLVAPQ9BX97 442 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 TRIM7Q9C029 511 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 PLEKHA5Q9HAU0 1116 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 PARVAQ9NVD7 372 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 NXF1Q9UBU9 619 aaKnown RBP12.52□□□□□ -0.4
SMAD3-202ENST00000439724 AMACRQ9UHK6 382 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 LCMT1Q9UIC8 334 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 NFU1Q9UMS0 254 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 DERAQ9Y315 318 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 NR2E1Q9Y466 385 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.4
SMAD3-202ENST00000439724 PDCD11Q14690 1871 aaKnown RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 TCRBV5S1A1TA0A578 114 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 FAM187AA6NFU0 413 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 MED7O43513 233 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 AXLP30530 894 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 HOXA11P31270 313 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 HOXC8P31273 242 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 CHRNA3P32297 505 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 LACTBP83111 547 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 C2CD6Q53TS8 623 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 AADACL2Q6P093 401 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 SLC27A1Q6PCB7 646 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 CATSPER4Q7RTX7 472 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 SLC13A5Q86YT5 568 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 TTC39CQ8N584 583 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-202ENST00000439724 FEZF2Q8TBJ5 459 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 GDAP1L1Q96MZ0 367 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 SDCBP2Q9H190 292 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 LHX5Q9H2C1 402 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 ERVK-5Q9HDB9 667 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
SMAD3-202ENST00000439724 TTI1O43156 1089 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 PSTPIP1O43586 416 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 CILPO75339 1184 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 NPTXRO95502 500 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 MYL3P08590 195 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 AKR1A1P14550 325 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 FGFR4P22455 802 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 ECHS1P30084 290 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 RAD23BP54727 409 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 RBP5P82980 135 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 TAP1Q03518 808 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 CRHR2Q13324 411 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 HIC1Q14526 733 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 ZNF394Q53GI3 561 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 HSP90B2PQ58FF3 399 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 PRELID2Q8N945 189 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-202ENST00000439724 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 SNX27Q96L92 541 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 OSMRQ99650 979 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 CDHR5Q9HBB8 845 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMAD3-202ENST00000439724 TRIP11Q15643 1979 aa12.51□□□□□ -0.41
SMAD3-202ENST00000439724 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 FSCN2O14926 492 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 TLR3O15455 904 aaKnown RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 KPNA6O60684 536 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 CD19P15391 556 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 TM4SF4P48230 202 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 GSCP56915 257 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 BEX3Q00994 111 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms