RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 DDTLA6NHG4 134 aaPredicted RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 PIK3CDO00329 1044 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ASMTLO95671 621 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ADRB2P07550 413 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ALAS1P13196 640 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 EIF2AK2P19525 551 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 CYP3A7P24462 503 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ARL4CP56559 192 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TAS2R40P59535 323 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SLC34A1Q06495 639 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 GRAMD1BQ3KR37 738 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 PDIK1LQ8N165 341 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CALN1Q9BXU9 219 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SENP1Q9P0U3 644 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SLC17A7Q9P2U7 560 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 PRKAG3Q9UGI9 489 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 LIN7AO14910 233 aaPredicted RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 WFS1O76024 890 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SERPINB2P05120 415 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CYP1A2P05177 515 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TM4SF1P30408 202 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CRKP46108 304 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 LIG4P49917 911 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TRAF1Q13077 416 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 PPP2R5CQ13362 524 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 MAPK6Q16659 721 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CYP1B1Q16678 543 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CWF19L1Q69YN2 538 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 IRGCQ6NXR0 463 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 DNAJC24Q6P3W2 148 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 MOXD1Q6UVY6 613 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TTC7BQ86TV6 843 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ARID3BQ8IVW6 561 aaPredicted RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 MFN1Q8IWA4 741 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 FAM71AQ8IYT1 594 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 MCOLN2Q8IZK6 566 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SLC26A7Q8TE54 656 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 LENG9Q96B70 501 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 BORCS6Q96GS4 357 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 C8orf37Q96NL8 207 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ACAP3Q96P50 834 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CSRNP1Q96S65 589 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 IWS1Q96ST2 819 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 PAFAH2Q99487 392 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 MAK16Q9BXY0 300 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 CADM1Q9BY67 442 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 VCX3BQ9H321 246 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 VCX3AQ9NNX9 186 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TMOD2Q9NZR1 351 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 WRAP73Q9P2S5 460 aaPredicted RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 PCSK1NQ9UHG2 260 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 NENFQ9UMX5 172 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ZBTB12Q9Y330 459 aaPredicted RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 MAD1L1Q9Y6D9 718 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 PLCH1Q4KWH8 1693 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 BCORQ6W2J9 1755 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 FRMPD4Q14CM0 1322 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 COPEO14579 308 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TOM1L1O75674 476 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 PSMG1O95456 288 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 GNA15P30679 374 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ECE1P42892 770 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 GEMIN4P57678 1058 aaKnown RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 CENPCQ03188 943 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CCNG2Q16589 344 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CLEC16AQ2KHT3 1053 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 ACSBG2Q5FVE4 666 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TMEM179Q6ZVK1 233 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 SV2AQ7L0J3 742 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 RASSF3Q86WH2 238 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 RIBC1Q8N443 379 aaPredicted RBP9.54□□□□□ -0.88
COPB1-202ENST00000439561 ATP11CQ8NB49 1132 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 TRIM11Q96F44 468 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 CLPTM1LQ96KA5 538 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 MCEEQ96PE7 176 aa9.54□□□□□ -0.88
COPB1-202ENST00000439561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 MAGEA13PA6NCF6 341 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 SPECC1L-ADORA2AF8WAN1 911 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 PFDN1O60925 122 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 USP1O94782 785 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 FESP07332 822 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ACADSP16219 412 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 SLC1A1P43005 524 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ACOT2P49753 483 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ACVR2BQ13705 512 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 KCNT1Q5JUK3 1230 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 SCARA5Q6ZMJ2 495 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 RFX6Q8HWS3 928 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 CEP120Q8N960 986 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.53□□□□□ -0.88
COPB1-202ENST00000439561 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 SLC7A6OSQ96CW6 309 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 CEP170P1Q96L14 293 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 TDRD3Q9H7E2 651 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms