RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
APP-208ENST00000439274 KLHL14Q9P2G3 628 aa16.28■□□□□ 0.2
APP-208ENST00000439274 FAM47DPA6NHR8 397 aa16.28■□□□□ 0.2
APP-208ENST00000439274 WNT10BO00744 389 aa16.28■□□□□ 0.2
APP-208ENST00000439274 LIASO43766 372 aa16.28■□□□□ 0.2
APP-208ENST00000439274 DGAT1O75907 488 aa16.28■□□□□ 0.2
APP-208ENST00000439274 KCNA2P16389 499 aa16.28■□□□□ 0.2
APP-208ENST00000439274 CLDN10P78369 228 aa16.28■□□□□ 0.2
APP-208ENST00000439274 DNAJC3Q13217 504 aa16.28■□□□□ 0.2
APP-208ENST00000439274 MFSD7Q6UXD7 560 aa16.28■□□□□ 0.2
APP-208ENST00000439274 VSIG10LQ86VR7 867 aa16.28■□□□□ 0.2
APP-208ENST00000439274 GBP7Q8N8V2 638 aaPredicted RBP16.28■□□□□ 0.2
APP-208ENST00000439274 BBOF1Q8ND07 529 aa16.28■□□□□ 0.2
APP-208ENST00000439274 LPAR1Q92633 364 aa16.28■□□□□ 0.2
APP-208ENST00000439274 ATP6V0A1Q93050 837 aa16.28■□□□□ 0.2
APP-208ENST00000439274 MRPL47Q9HD33 250 aaKnown RBP16.28■□□□□ 0.2
APP-208ENST00000439274 ARHGEF3Q9NR81 526 aa16.28■□□□□ 0.2
APP-208ENST00000439274 RNF146Q9NTX7 359 aa16.28■□□□□ 0.2
APP-208ENST00000439274 AGO2Q9UKV8 859 aaKnown RBP16.28■□□□□ 0.2
APP-208ENST00000439274 ZNF148Q9UQR1 794 aa16.28■□□□□ 0.2
APP-208ENST00000439274 NUB1Q9Y5A7 615 aa16.28■□□□□ 0.2
APP-208ENST00000439274 ANP32DO95626 131 aa16.27■□□□□ 0.2
APP-208ENST00000439274 PECAM1P16284 738 aaPredicted RBP16.27■□□□□ 0.2
APP-208ENST00000439274 ARSEP51690 589 aa16.27■□□□□ 0.2
APP-208ENST00000439274 FKBP1CQ5VVH2 108 aa16.27■□□□□ 0.2
APP-208ENST00000439274 TXNRD3NBQ6F5E7 133 aa16.27■□□□□ 0.2
APP-208ENST00000439274 PPP1R21Q6ZMI0 780 aa16.27■□□□□ 0.2
APP-208ENST00000439274 ASRGL1Q7L266 308 aa16.27■□□□□ 0.2
APP-208ENST00000439274 RPAINQ86UA6 219 aa16.27■□□□□ 0.2
APP-208ENST00000439274 C4orf33Q8N1A6 199 aa16.27■□□□□ 0.2
APP-208ENST00000439274 MCPH1Q8NEM0 835 aa16.27■□□□□ 0.2
APP-208ENST00000439274 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
APP-208ENST00000439274 KIAA1683Q9H0B3 1180 aa16.27■□□□□ 0.2
APP-208ENST00000439274 SLCO1B3Q9NPD5 702 aa16.27■□□□□ 0.2
APP-208ENST00000439274 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
APP-208ENST00000439274 GRID1Q9ULK0 1009 aa16.27■□□□□ 0.2
APP-208ENST00000439274 WDR81Q562E7 1941 aa16.27■□□□□ 0.2
APP-208ENST00000439274 BANF1O75531 89 aa16.27■□□□□ 0.2
APP-208ENST00000439274 KRT1P04264 644 aa16.27■□□□□ 0.2
APP-208ENST00000439274 ALADP13716 330 aa16.27■□□□□ 0.2
APP-208ENST00000439274 CCND2P30279 289 aa16.27■□□□□ 0.2
APP-208ENST00000439274 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
APP-208ENST00000439274 PSMC4P43686 418 aa16.27■□□□□ 0.2
APP-208ENST00000439274 IL9RQ01113 521 aa16.27■□□□□ 0.2
APP-208ENST00000439274 MAP3K10Q02779 954 aa16.27■□□□□ 0.2
APP-208ENST00000439274 MKRN3Q13064 507 aaKnown RBP16.27■□□□□ 0.2
APP-208ENST00000439274 GPS1Q13098 491 aa16.27■□□□□ 0.2
APP-208ENST00000439274 PKN2Q16513 984 aaKnown RBP16.27■□□□□ 0.2
APP-208ENST00000439274 TRABD2AQ86V40 505 aa16.27■□□□□ 0.2
APP-208ENST00000439274 CCDC125Q86Z20 511 aa16.27■□□□□ 0.2
APP-208ENST00000439274 RELL1Q8IUW5 271 aa16.27■□□□□ 0.2
APP-208ENST00000439274 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.2
APP-208ENST00000439274 FEZF2Q8TBJ5 459 aa16.27■□□□□ 0.2
APP-208ENST00000439274 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.2
APP-208ENST00000439274 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
APP-208ENST00000439274 EBF2Q9HAK2 575 aa16.27■□□□□ 0.2
APP-208ENST00000439274 KIAA1586Q9HCI6 787 aa16.27■□□□□ 0.2
APP-208ENST00000439274 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
APP-208ENST00000439274 RBAKQ9NYW8 714 aaPredicted RBP16.27■□□□□ 0.2
APP-208ENST00000439274 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.2
APP-208ENST00000439274 DNALI1O14645 258 aaPredicted RBP16.26■□□□□ 0.19
APP-208ENST00000439274 ZBED4O75132 1171 aa16.26■□□□□ 0.19
APP-208ENST00000439274 ECM2O94769 699 aaPredicted RBP16.26■□□□□ 0.19
APP-208ENST00000439274 ASMTLO95671 621 aa16.26■□□□□ 0.19
APP-208ENST00000439274 HARSP12081 509 aaKnown RBP16.26■□□□□ 0.19
APP-208ENST00000439274 ZNF252P-AS1Q0IIN9 211 aa16.26■□□□□ 0.19
APP-208ENST00000439274 PHF13Q86YI8 300 aaPredicted RBP16.26■□□□□ 0.19
APP-208ENST00000439274 SLITRK1Q96PX8 696 aa16.26■□□□□ 0.19
APP-208ENST00000439274 ACTL7BQ9Y614 415 aa16.26■□□□□ 0.19
APP-208ENST00000439274 ARID2Q68CP9 1835 aa16.26■□□□□ 0.19
APP-208ENST00000439274 F8VP50 259 aa16.26■□□□□ 0.19
APP-208ENST00000439274 VWA5AO00534 786 aa16.26■□□□□ 0.19
APP-208ENST00000439274 EDN1P05305 212 aa16.26■□□□□ 0.19
APP-208ENST00000439274 PSAPP07602 524 aa16.26■□□□□ 0.19
APP-208ENST00000439274 MSH2P43246 934 aa16.26■□□□□ 0.19
APP-208ENST00000439274 RNF43Q68DV7 783 aa16.26■□□□□ 0.19
APP-208ENST00000439274 RDM1Q8NG50 284 aa16.26■□□□□ 0.19
APP-208ENST00000439274 ASAP3Q8TDY4 903 aa16.26■□□□□ 0.19
APP-208ENST00000439274 CFAP57Q96MR6 1250 aa16.26■□□□□ 0.19
APP-208ENST00000439274 SENP7Q9BQF6 1050 aa16.26■□□□□ 0.19
APP-208ENST00000439274 MYLK2Q9H1R3 596 aa16.26■□□□□ 0.19
APP-208ENST00000439274 TRABDQ9H4I3 376 aa16.26■□□□□ 0.19
APP-208ENST00000439274 VPS37BQ9H9H4 285 aa16.26■□□□□ 0.19
APP-208ENST00000439274 JPH1Q9HDC5 661 aaPredicted RBP16.26■□□□□ 0.19
APP-208ENST00000439274 SCINQ9Y6U3 715 aa16.26■□□□□ 0.19
APP-208ENST00000439274 GOLGA8SH3BPF8 625 aa16.25■□□□□ 0.19
APP-208ENST00000439274 GOLGA8MH3BSY2 632 aa16.25■□□□□ 0.19
APP-208ENST00000439274 PIAS1O75925 651 aa16.25■□□□□ 0.19
APP-208ENST00000439274 ABHD2P08910 425 aa16.25■□□□□ 0.19
APP-208ENST00000439274 CLNS1AP54105 237 aaKnown RBP16.25■□□□□ 0.19
APP-208ENST00000439274 ACTR2P61160 394 aa16.25■□□□□ 0.19
APP-208ENST00000439274 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
APP-208ENST00000439274 OGDHQ02218 1023 aa16.25■□□□□ 0.19
APP-208ENST00000439274 GPRASP2Q96D09 838 aa16.25■□□□□ 0.19
APP-208ENST00000439274 MCEEQ96PE7 176 aa16.25■□□□□ 0.19
APP-208ENST00000439274 PLCD4Q9BRC7 762 aa16.25■□□□□ 0.19
APP-208ENST00000439274 TARS2Q9BW92 718 aaKnown RBP16.25■□□□□ 0.19
APP-208ENST00000439274 PARVAQ9NVD7 372 aa16.25■□□□□ 0.19
APP-208ENST00000439274 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
APP-208ENST00000439274 LRRIQ4A6NIV6 560 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms