RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DMRT3Q9NQL9 472 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 TMEM140Q9NV12 185 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 LRIT1Q9P2V4 623 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 USP25Q9UHP3 1055 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 KCNE5Q9UJ90 142 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 AJAP1Q9UKB5 411 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 ZBTB21Q9ULJ3 1066 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 ZNF462Q96JM2 2506 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 EPG5Q9HCE0 2579 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 CHD6Q8TD26 2715 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 INO80B-WBP1J3KQ70 363 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 MGST3O14880 152 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 ENDOD1O94919 500 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 CKBP12277 381 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 FPR1P21462 350 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 MCAMP43121 646 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 HNRNPMP52272 730 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 ATXN1P54253 815 aaKnown RBP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 SCAND1P57086 179 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 MRPS35P82673 323 aaKnown RBP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 MALLQ13021 153 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 NOMO1Q15155 1222 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 PTCD3Q96EY7 689 aaKnown RBP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 PDLIM2Q96JY6 352 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 MYOCQ99972 504 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 AIFM2Q9BRQ8 373 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 INO80BQ9C086 356 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 UNKLQ9H9P5 680 aaKnown RBP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 VTA1Q9NP79 307 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 SEMA4GQ9NTN9 838 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 FBXO34Q9NWN3 711 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 FOXJ2Q9P0K8 574 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 SLC23A1Q9UHI7 598 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 MTO1Q9Y2Z2 717 aaKnown RBP4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 PNPLA6Q8IY17 1366 aa4.01□□□□□ -1.77
HMGB1P18-201ENST00000438801 TULP4Q9NRJ4 1543 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ZC3H13Q5T200 1668 aaKnown RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 POLR2AP24928 1970 aaKnown RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 MYADML2A6NDP7 307 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 TEX33O43247 280 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 BRINP1O60477 761 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ERN1O75460 977 aaKnown RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 MATN4O95460 622 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 GSPT1P15170 499 aaKnown RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 SOX5P35711 763 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 VAV2P52735 878 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 CACNA2D1P54289 1103 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 SRSF2Q01130 221 aaKnown RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 SP5Q6BEB4 398 aaPredicted RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 SEM1Q6ZVN7 128 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 UBE3BQ7Z3V4 1068 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ARHGEF25Q86VW2 580 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ACTRT2Q8TDY3 377 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ZNF384Q8TF68 577 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 MARS2Q96GW9 593 aaKnown RBP4□□□□□ -1.77
HMGB1P18-201ENST00000438801 CAAP1Q9H8G2 361 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 DMTF1Q9Y222 760 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 FRMD4BQ9Y2L6 1034 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ACTL7AQ9Y615 435 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ZDBF2Q9HCK1 2354 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 SLIT2O94813 1529 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 ABCA10Q8WWZ4 1543 aa4□□□□□ -1.77
HMGB1P18-201ENST00000438801 CFAP74Q9C0B2 1584 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 MUC6Q6W4X9 2439 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 SETD5Q9C0A6 1442 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 GPR32O75388 356 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 C1QL1O75973 258 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 ALAS1P13196 640 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 PCSK1P29120 753 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 SLC6A9P48067 706 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 SLC5A3P53794 718 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 NHLH1Q02575 133 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 MGAT2Q10469 447 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 FAPQ12884 760 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 SEPT2Q15019 361 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 COLGALT2Q8IYK4 626 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 LNX2Q8N448 690 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 NUP133Q8WUM0 1156 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 LRRC59Q96AG4 307 aaKnown RBP3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 CYFIP2Q96F07 1278 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 NAF1Q96HR8 494 aaKnown RBP3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 C14orf119Q9NWQ9 140 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 DNAJC28Q9NX36 388 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 KCTD5Q9NXV2 234 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 TBX22Q9Y458 520 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 KDM5AP29375 1690 aaKnown RBP3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 ABCC3O15438 1527 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 ATP7AQ04656 1500 aa3.99□□□□□ -1.77
HMGB1P18-201ENST00000438801 ABCC5O15440 1437 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 FAM171A2A8MVW0 826 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 RBMXL2O75526 392 aaKnown RBP3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 GPR3P46089 330 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 NOMO3P69849 1222 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 MTM1Q13496 603 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 STAT4Q14765 748 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 NOMO2Q5JPE7 1267 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 NOP9Q86U38 636 aaKnown RBP3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 FITM2Q8N6M3 262 aa3.98□□□□□ -1.77
HMGB1P18-201ENST00000438801 CCHCR1Q8TD31 782 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms