RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 LRIG3Q6UXM1 1119 aa14.77□□□□□ -0.04
PTCHD3-201ENST00000438700 TCHPQ9BT92 498 aa14.77□□□□□ -0.04
PTCHD3-201ENST00000438700 ZFYVE28Q9HCC9 887 aa14.77□□□□□ -0.04
PTCHD3-201ENST00000438700 KAT6AQ92794 2004 aa14.77□□□□□ -0.04
PTCHD3-201ENST00000438700 ZSWIM8A7E2V4 1837 aa14.77□□□□□ -0.04
PTCHD3-201ENST00000438700 INO80B-WBP1J3KQ70 363 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 TOM1L1O75674 476 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 LDHAP00338 332 aaKnown RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 HOXD8P13378 290 aaPredicted RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 GRM1Q13255 1194 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 MTMR3Q13615 1198 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 DHX34Q14147 1143 aaKnown RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 PPP2R5EQ16537 467 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 DGKDQ16760 1214 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 ZACNQ401N2 412 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 WDR44Q5JSH3 913 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 C15orf39Q6ZRI6 1047 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 PASD1Q8IV76 773 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 FBXO25Q8TCJ0 367 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 LENG1Q96BZ8 264 aaPredicted RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 ZIC5Q96T25 663 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 PPP1R16BQ96T49 567 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 ACO2Q99798 780 aaKnown RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 INO80BQ9C086 356 aaPredicted RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 UVRAGQ9P2Y5 699 aa14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 DDX20Q9UHI6 824 aaKnown RBP14.77□□□□□ -0.05
PTCHD3-201ENST00000438700 DYNC1LI2O43237 492 aaPredicted RBP14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 HOXC6P09630 235 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 KCNJ1P48048 391 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 CLDN10P78369 228 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 FAM228AQ86W67 206 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 USP6NLQ92738 828 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 MINDY3Q9H8M7 445 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 ZDHHC18Q9NUE0 388 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 RASAL2Q9UJF2 1139 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 COL1A2P08123 1366 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 MAGEB2O15479 319 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 ASAP2O43150 1006 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 B4GALT5O43286 388 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 CFHP08603 1231 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 RRM1P23921 792 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 CTNNA2P26232 953 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 CHRNA3P32297 505 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 SREBF2Q12772 1141 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 CLUL1Q15846 466 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 SCARA3Q6AZY7 606 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 SLC13A5Q86YT5 568 aaPredicted RBP14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 CCDC105Q8IYK2 499 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 AKT3Q9Y243 479 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 PCDHA3Q9Y5H8 950 aa14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 ATXN2Q99700 1313 aaKnown RBP14.76□□□□□ -0.05
PTCHD3-201ENST00000438700 FAM187AA6NFU0 413 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 A6NNZ2 444 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 TNPO2O14787 897 aaKnown RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 VNN1O95497 513 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 C4BPAP04003 597 aaKnown RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 RARAP10276 462 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 UNGP13051 313 aaPredicted RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 TNFSF9P41273 254 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 PTGIRP43119 386 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 RPL21P46778 160 aaKnown RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 RWDD2BP57060 319 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 MBTD1Q05BQ5 628 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 KRT71Q3SY84 523 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 TUBB8Q3ZCM7 444 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 EMC10Q5UCC4 262 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 OLFML2BQ68BL8 750 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 MTHFD1LQ6UB35 978 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 MICALCLQ6ZW33 695 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ENOSF1Q7L5Y1 443 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 YTHDF3Q7Z739 585 aaKnown RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 FZD8Q9H461 694 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 APOBEC3GQ9HC16 384 aaKnown RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 HAUS2Q9NVX0 235 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ACKR2O00590 384 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ABLIM1O14639 778 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 FAM189A1O60320 539 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ZC3H11AO75152 810 aaKnown RBP eCLIP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 VTNP04004 478 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ZNF865P0CJ78 1059 aaPredicted RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 HSPA6P17066 643 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 RGS2P41220 211 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 PSEN1P49768 467 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 IFFO1Q0D2I5 559 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 GRIK4Q16099 956 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ODF2Q5BJF6 829 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 TMEM270Q6UE05 265 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 CEP57Q86XR8 500 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 MCOLN2Q8IZK6 566 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 CCDC114Q96M63 670 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 IFT122Q9HBG6 1241 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 SUFUQ9UMX1 484 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 GNEQ9Y223 722 aaKnown RBP14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 PCDHB2Q9Y5E7 798 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 UMODL1Q5DID0 1318 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 CNTNAP2Q9UHC6 1331 aa14.75□□□□□ -0.05
PTCHD3-201ENST00000438700 CHUKO15111 745 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms