RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 ELF1P32519 619 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 ARPP19P56211 112 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 RBP5P82980 135 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 OTOP3Q7RTS5 596 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 GUF1Q8N442 669 aaKnown RBP19.21■□□□□ 0.67
NCSTN-208ENST00000438008 TDRD5Q8NAT2 981 aaKnown RBP19.21■□□□□ 0.67
NCSTN-208ENST00000438008 OR5B17Q8NGF7 314 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 SIX4Q9UIU6 781 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 TRAF3IP3Q9Y228 551 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 CLUHO75153 1309 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 PTPRJQ12913 1337 aa19.21■□□□□ 0.67
NCSTN-208ENST00000438008 TULP1O00294 542 aaPredicted RBP19.2■□□□□ 0.66
NCSTN-208ENST00000438008 XYLBO75191 536 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 TNNC2P02585 160 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 SP100P23497 879 aaPredicted RBP19.2■□□□□ 0.66
NCSTN-208ENST00000438008 PNOCQ13519 176 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 LMBRD2Q68DH5 695 aaPredicted RBP19.2■□□□□ 0.66
NCSTN-208ENST00000438008 SPATA20Q8TB22 786 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 ACSF2Q96CM8 615 aaPredicted RBP19.2■□□□□ 0.66
NCSTN-208ENST00000438008 FAM84AQ96KN4 292 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 FNBP1Q96RU3 617 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 CGRRF1Q99675 332 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 C1QTNF1Q9BXJ1 281 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 RMND1Q9NWS8 449 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 MUTYHQ9UIF7 546 aa19.2■□□□□ 0.66
NCSTN-208ENST00000438008 CALUO43852 315 aaPredicted RBP19.19■□□□□ 0.66
NCSTN-208ENST00000438008 SEC24AO95486 1093 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 NR3C1P04150 777 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 CPB1P15086 417 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 GPR17Q13304 367 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 NFIL3Q16649 462 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 SCARA3Q6AZY7 606 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 METTL23Q86XA0 190 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 GSDMAQ96QA5 445 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 GZF1Q9H116 711 aaPredicted RBP19.19■□□□□ 0.66
NCSTN-208ENST00000438008 CYP4F11Q9HBI6 524 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 GDAP2Q9NXN4 497 aa19.19■□□□□ 0.66
NCSTN-208ENST00000438008 HOOK1Q9UJC3 728 aaKnown RBP19.19■□□□□ 0.66
NCSTN-208ENST00000438008 PRRG1O14668 218 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 CCL16O15467 120 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 SMC2O95347 1197 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 KRT19P08727 400 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 DLATP10515 647 aaKnown RBP19.18■□□□□ 0.66
NCSTN-208ENST00000438008 TNNI1P19237 187 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 ADCY1Q08828 1119 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 WSCD1Q658N2 575 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 RNF19BQ6ZMZ0 732 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 TRAPPC11Q7Z392 1133 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 GRASPQ7Z6J2 395 aaPredicted RBP19.18■□□□□ 0.66
NCSTN-208ENST00000438008 THEM5Q8N1Q8 247 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 CCDC127Q96BQ5 260 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 RTP3Q9BQQ7 232 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 DENND4AQ7Z401 1863 aa19.18■□□□□ 0.66
NCSTN-208ENST00000438008 SCN1AP35498 2009 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
NCSTN-208ENST00000438008 GADD45BO75293 160 aaPredicted RBP19.17■□□□□ 0.66
NCSTN-208ENST00000438008 VNN2O95498 520 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 OR4Q2P0C623 313 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 CLDN10P78369 228 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 BFSP1Q12934 665 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 MYO1EQ12965 1108 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 PTPN21Q16825 1174 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 COBLL1Q53SF7 1204 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 TMEM86AQ8N2M4 240 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 OR10T2Q8NGX3 314 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 SPATA18Q8TC71 538 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 PARD3BQ8TEW8 1205 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 ZNF516Q92618 1163 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 GTPBP4Q9BZE4 634 aaKnown RBP19.17■□□□□ 0.66
NCSTN-208ENST00000438008 ZCWPW1Q9H0M4 648 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.17■□□□□ 0.66
NCSTN-208ENST00000438008 EPS15L1Q9UBC2 864 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 R3HCC1Q9Y3T6 440 aaKnown RBP19.17■□□□□ 0.66
NCSTN-208ENST00000438008 PCDHA5Q9Y5H7 936 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 INSL5Q9Y5Q6 135 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 C2orf16Q68DN1 1984 aa19.17■□□□□ 0.66
NCSTN-208ENST00000438008 MAPK13O15264 365 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 GPR37L1O60883 481 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 HUS1O60921 280 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 LRG1P02750 347 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 AP3M2P53677 418 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 ZCWPW2Q504Y3 356 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 ZNF658Q5TYW1 1059 aaPredicted RBP19.16■□□□□ 0.66
NCSTN-208ENST00000438008 DPH6Q7L8W6 267 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 LIMS2Q7Z4I7 341 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 PDCL2Q8N4E4 241 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 TOP6BLQ8N6T0 577 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 PLEKHO2Q8TD55 490 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 EDAQ92838 391 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 SMARCE1Q969G3 411 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 HPDLQ96IR7 371 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 TMEM209Q96SK2 561 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 AVENQ9NQS1 362 aaPredicted RBP19.16■□□□□ 0.66
NCSTN-208ENST00000438008 DNMT3BQ9UBC3 853 aaKnown RBP19.16■□□□□ 0.66
NCSTN-208ENST00000438008 HSFX1Q9UBD0 423 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 LIMD1Q9UGP4 676 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 L1RE1Q9UN81 338 aa19.16■□□□□ 0.66
NCSTN-208ENST00000438008 POLIQ9UNA4 740 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms