RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
CALD1-209ENST00000436461 WSCD1Q658N2 575 aa18■□□□□ 0.47
CALD1-209ENST00000436461 SUSD3Q96L08 255 aa18■□□□□ 0.47
CALD1-209ENST00000436461 MRPL45Q9BRJ2 306 aaKnown RBP18■□□□□ 0.47
CALD1-209ENST00000436461 NIF3L1Q9GZT8 377 aa18■□□□□ 0.47
CALD1-209ENST00000436461 GDAP2Q9NXN4 497 aa18■□□□□ 0.47
CALD1-209ENST00000436461 APEX2Q9UBZ4 518 aa18■□□□□ 0.47
CALD1-209ENST00000436461 FHOD1Q9Y613 1164 aa18■□□□□ 0.47
CALD1-209ENST00000436461 MYO9BQ13459 2157 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 A0A1W2PPC1 479 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 M0QZQ0 153 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 CBFA2T2O43439 604 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 NOL4O94818 638 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 EFEMP2O95967 443 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 CD58P19256 250 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 PPM1AP35813 382 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 ZNF75DP51815 510 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 RTP2Q5QGT7 225 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 KLHDC7AQ5VTJ3 777 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 TAF4BQ92750 862 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 KREMEN1Q96MU8 473 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 UBE2TQ9NPD8 197 aaPredicted RBP17.99■□□□□ 0.47
CALD1-209ENST00000436461 NME7Q9Y5B8 376 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 COL4A4P53420 1690 aaPredicted RBP17.99■□□□□ 0.47
CALD1-209ENST00000436461 ATG2AQ2TAZ0 1938 aa17.99■□□□□ 0.47
CALD1-209ENST00000436461 RFXAPO00287 272 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 C2CD2LO14523 706 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 DNAJB1P25685 340 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 CDR1P51861 262 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 CUL2Q13617 745 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 ARHGAP44Q17R89 818 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 IQCEQ6IPM2 695 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 GPIHBP1Q8IV16 184 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
CALD1-209ENST00000436461 KBTBD7Q8WVZ9 684 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 AUTS2Q8WXX7 1259 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 GANQ9H2C0 597 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 RWDD3Q9Y3V2 267 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 C5orf67F2Z3F1 127 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 GRM6O15303 877 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 HUS1O60921 280 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 TPM3P06753 285 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
CALD1-209ENST00000436461 ODC1P11926 461 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 POLR2FP61218 127 aaKnown RBP17.98■□□□□ 0.47
CALD1-209ENST00000436461 PLCB3Q01970 1234 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 ORC1Q13415 861 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 OSTM1Q86WC4 334 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 ADGRF2Q8IZF7 708 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 VPS52Q8N1B4 723 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 APPL2Q8NEU8 664 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 GDPD5Q8WTR4 605 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 POF1BQ8WVV4 589 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 LRCH3Q96II8 777 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 PLVAPQ9BX97 442 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 BCO2Q9BYV7 579 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 NLRC4Q9NPP4 1024 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 DNAJC12Q9UKB3 198 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 PCDHB8Q9UN66 801 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
CALD1-209ENST00000436461 A0A1W2PQC6 194 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 TRAPPC3O43617 180 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 ADCY5O95622 1261 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 SOD2P04179 222 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 UCHL3P15374 230 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 KRT17Q04695 432 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 RAPGEF1Q13905 1077 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 PRSS55Q6UWB4 352 aaPredicted RBP17.97■□□□□ 0.47
CALD1-209ENST00000436461 DDX53Q86TM3 631 aaKnown RBP17.97■□□□□ 0.47
CALD1-209ENST00000436461 TOP6BLQ8N6T0 577 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 NEK11Q8NG66 645 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 SPPL3Q8TCT6 385 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 PLCB1Q9NQ66 1216 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 TRANK1O15050 2925 aa17.97■□□□□ 0.47
CALD1-209ENST00000436461 P4HA1P13674 534 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 FGFR3P22607 806 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 ACAT1P24752 427 aaKnown RBP17.96■□□□□ 0.47
CALD1-209ENST00000436461 LMO2P25791 158 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 ERVFC1P60507 584 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 GPM6BQ13491 265 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 ZNF394Q53GI3 561 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.47
CALD1-209ENST00000436461 OR6B3Q8NGW1 331 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 TTPALQ9BTX7 342 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.47
CALD1-209ENST00000436461 HERC2P3Q9BVR0 1158 aa17.96■□□□□ 0.47
CALD1-209ENST00000436461 MYO7AQ13402 2215 aa17.95■□□□□ 0.46
CALD1-209ENST00000436461 RNF225M0QZC1 329 aaPredicted RBP17.95■□□□□ 0.46
CALD1-209ENST00000436461 RB1P06400 928 aa17.95■□□□□ 0.46
CALD1-209ENST00000436461 PDGFRBP09619 1106 aa17.95■□□□□ 0.46
CALD1-209ENST00000436461 TRIM21P19474 475 aaKnown RBP17.95■□□□□ 0.46
CALD1-209ENST00000436461 CA8P35219 290 aa17.95■□□□□ 0.46
CALD1-209ENST00000436461 GCNT1Q02742 428 aa17.95■□□□□ 0.46
CALD1-209ENST00000436461 YWHAHQ04917 246 aaPredicted RBP17.95■□□□□ 0.46
CALD1-209ENST00000436461 ELAVL2Q12926 359 aaKnown RBP17.95■□□□□ 0.46
CALD1-209ENST00000436461 CAMK1Q14012 370 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms